RNA–Protein interactions for RNA: ENST00000519112.5

BRD9-217, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 861 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-217ENST00000519112 C10orf128Q5T292 105 aa11.96□□□□□ -0.49
BRD9-217ENST00000519112 ZNF786Q8N393 782 aa11.96□□□□□ -0.49
BRD9-217ENST00000519112 CLDN22Q8N7P3 220 aa11.96□□□□□ -0.49
BRD9-217ENST00000519112 PRRC1Q96M27 445 aa11.96□□□□□ -0.49
BRD9-217ENST00000519112 DYNLRB1Q9NP97 96 aa11.96□□□□□ -0.49
BRD9-217ENST00000519112 FBXO9Q9UK97 447 aaPredicted RBP11.96□□□□□ -0.49
BRD9-217ENST00000519112 HIF3AQ9Y2N7 669 aa11.96□□□□□ -0.49
BRD9-217ENST00000519112 UGT2A1Q9Y4X1 527 aa11.96□□□□□ -0.49
BRD9-217ENST00000519112 CENPBD1B2RD01 187 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 MCIDASD6RGH6 385 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 SYNGR3O43761 229 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 LMX1BO60663 402 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 HPXP02790 462 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 TACSTD2P09758 323 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 FAM157BP0CG42 384 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 FAM157CP0CG43 387 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 IFI30P13284 250 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 APEHP13798 732 aaKnown RBP11.95□□□□□ -0.5
BRD9-217ENST00000519112 TCN1P20061 433 aaPredicted RBP11.95□□□□□ -0.5
BRD9-217ENST00000519112 MAKP20794 623 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 CDAP32320 146 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 GALK2Q01415 458 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 FMODQ06828 376 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 ST3GAL3Q11203 375 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 IQCCQ4KMZ1 466 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 ELFN2Q5R3F8 820 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 GKAP1Q5VSY0 366 aaPredicted RBP11.95□□□□□ -0.5
BRD9-217ENST00000519112 PODNL1Q6PEZ8 512 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 SLC16A14Q7RTX9 510 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 TSEN54Q7Z6J9 526 aaKnown RBP11.95□□□□□ -0.5
BRD9-217ENST00000519112 LRRC18Q8N456 261 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 LRRC75AQ8NAA5 344 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 CPEB3Q8NE35 698 aaKnown RBP11.95□□□□□ -0.5
BRD9-217ENST00000519112 SLC30A7Q8NEW0 376 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 UBASH3BQ8TF42 649 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 NABP1Q96AH0 204 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 BPIFA2Q96DR5 249 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 REV1Q9UBZ9 1251 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 SLC7A8Q9UHI5 535 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 CDC42EP3Q9UKI2 254 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 FBXL3Q9UKT7 428 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 SPEF1Q9Y4P9 236 aa11.95□□□□□ -0.5
BRD9-217ENST00000519112 LOC100289279A0A1B0GTE1 492 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 NPIPB13A6NJU9 1138 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 NPIPB4C9JG80 1138 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 M0R233 179 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 CXCR6O00574 342 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 MGRN1O60291 552 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 PRSS23O95084 383 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 FARS2O95363 451 aaKnown RBP11.94□□□□□ -0.5
BRD9-217ENST00000519112 CLPTM1O96005 669 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 NAT2P11245 290 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 COL8A2P25067 703 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 GSK3BP49841 420 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 DAP3P51398 398 aaKnown RBP11.94□□□□□ -0.5
BRD9-217ENST00000519112 SLC7A2P52569 658 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 ERVS71-1P61550 626 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 SLC36A2Q495M3 483 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 ALG10Q5BKT4 473 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 SLC25A47Q6Q0C1 308 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 IL17RELQ6ZVW7 336 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 CBLL1Q75N03 491 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 IGFN1Q86VF2 1251 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 NRMQ8IXM6 262 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 OFCC1Q8IZS5 231 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 ZNF540Q8NDQ6 660 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 TSPAN32Q96QS1 320 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 BEX2Q9BXY8 128 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 OR51B6Q9H340 312 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 TXNIPQ9H3M7 391 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 RNF121Q9H920 327 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 CHODLQ9H9P2 273 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 DUSP13Q9UII6 198 aa11.94□□□□□ -0.5
BRD9-217ENST00000519112 ZNF346Q9UL40 294 aaKnown RBP11.94□□□□□ -0.5
BRD9-217ENST00000519112 NCR1O76036 304 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 TGFAP01135 160 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 IGHMP01871 453 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 ERCC1P07992 297 aaPredicted RBP11.93□□□□□ -0.5
BRD9-217ENST00000519112 ZNF84P51523 738 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 MRPS34P82930 218 aaKnown RBP11.93□□□□□ -0.5
BRD9-217ENST00000519112 PRKCDQ05655 676 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 ALKBH6Q3KRA9 238 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 FAM120AOSQ5T036 256 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 TMEM53Q6P2H8 277 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 TBPL2Q6SJ96 375 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 ARPINQ7Z6K5 226 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 RBM15BQ8NDT2 890 aaKnown RBP11.93□□□□□ -0.5
BRD9-217ENST00000519112 SPATA3Q8NHX4 192 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 LZICQ8WZA0 190 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 NSMAFQ92636 917 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 YIPF5Q969M3 257 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 HOPXQ9BPY8 73 aaPredicted RBP11.93□□□□□ -0.5
BRD9-217ENST00000519112 MS4A5Q9H3V2 200 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 SIAEQ9HAT2 523 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 MED4Q9NPJ6 270 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 ANK2Q01484 3957 aa11.93□□□□□ -0.5
BRD9-217ENST00000519112 IGLV3-9A0A075B6K5 115 aa11.92□□□□□ -0.5
BRD9-217ENST00000519112 TRAV27A0A087WT01 109 aa11.92□□□□□ -0.5
BRD9-217ENST00000519112 A0A087WUU8 490 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms