RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 RFC3P40938 356 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 STARP49675 285 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 SUCLG1P53597 346 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 CLDN17P56750 224 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 NCS1P62166 190 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 LSM3P62310 102 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 CAMK2DQ13557 499 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 DGUOKQ16854 277 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 CCDC58Q4VC31 144 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 TEX30Q5JUR7 227 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 VASNQ6EMK4 673 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 ABLIM2Q6H8Q1 611 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 GLB1L2Q8IW92 636 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 OTOSQ8NHW6 89 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 NEIL3Q8TAT5 605 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 ABTB1Q969K4 478 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 UCN2Q96RP3 112 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 EMC6Q9BV81 110 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC6A15Q9H2J7 730 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZDHHC11Q9H8X9 412 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 SIAEQ9HAT2 523 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 EXOSC4Q9NPD3 245 aaKnown RBP13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 KCNG2Q9UJ96 466 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 COPS3Q9UNS2 423 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 RCE1Q9Y256 329 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 GSTK1Q9Y2Q3 226 aa13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 COA3Q9Y2R0 106 aaPredicted RBP13.42□□□□□ -0.26
TRAPPC9-205ENST00000518839 MED12Q93074 2177 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 TRGV5A0A0B4J1U4 118 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 PLPP2O43688 288 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 CYTIPO60759 359 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 RAMP1O60894 148 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 TMCC2O75069 709 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 SYNGR4O95473 234 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 LALBAP00709 142 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 KRT8P05787 483 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF182P17025 639 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 SPINK2P20155 84 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 ALOX5APP20292 161 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 CRYBB2P43320 205 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 CSNK1A1P48729 337 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 TGM4P49221 684 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 HCCSP53701 268 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 CLDN15P56746 228 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 CLDN18P56856 261 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 OR12D2P58182 307 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 ADAM8P78325 824 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 DBPQ10586 325 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 HIST3H3Q16695 136 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 TP53I3Q53FA7 332 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC18B1Q6NT16 456 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 RPL22L1Q6P5R6 122 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC25A47Q6Q0C1 308 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 LYPD4Q6UWN0 246 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 SSX6Q7RTT6 188 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 DPY19L4Q7Z388 723 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 OR10H5Q8NGA6 315 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC39A7Q92504 469 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 TTYH2Q9BSA4 534 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 DCSTAMPQ9H295 470 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 LDAHQ9H6V9 325 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 EXO5Q9H790 373 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 GNG8Q9UK08 70 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 MCTS1Q9ULC4 181 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZMIZ1Q9ULJ6 1067 aa13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 SF3B6Q9Y3B4 125 aaKnown RBP13.41□□□□□ -0.26
TRAPPC9-205ENST00000518839 IGHV3-15A0A0B4J1V0 119 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 TRDV1A0A1B0GX56 115 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 METTL15A6NJ78 407 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF593O00488 134 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 GPR171O14626 319 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 TFECO14948 347 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 OGG1O15527 345 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 GPX5O75715 221 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 AQP8O94778 261 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 CELA3AP09093 270 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 GAAP10253 952 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 LAP3P28838 519 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 FGF9P31371 208 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF133P52736 654 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 RPS25P62851 125 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 FMODQ06828 376 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 ZNF684Q5T5D7 378 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 CD200R1LQ6Q8B3 271 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 LINC00299Q6ZSB3 139 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 TRILQ7L0X0 811 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 FCRLAQ7L513 359 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 CHMP1BQ7LBR1 199 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 MS4A15Q8N5U1 240 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 SLC26A10Q8NG04 563 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 OR6N1Q8NGY5 312 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 NDNFQ8TB73 568 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 DYNC2LI1Q8TCX1 351 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 SMAP2Q8WU79 429 aaPredicted RBP13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 TMEM54Q969K7 222 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 PELI1Q96FA3 418 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 CENPOQ9BU64 300 aa13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 MRPL22Q9NWU5 206 aaKnown RBP13.4□□□□□ -0.26
TRAPPC9-205ENST00000518839 TNRC6AQ8NDV7 1962 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms