RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 TAS2R60P59551 318 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 RND3P61587 244 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 RPL31P62899 125 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 DHODHQ02127 395 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 PRKCDQ05655 676 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 IL18R1Q13478 541 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 NECTIN1Q15223 517 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 IMPG1Q17R60 797 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 SLC36A2Q495M3 483 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ACTL10Q5JWF8 245 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 HHATQ5VTY9 493 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 BSPRYQ5W0U4 402 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 FAM219BQ5XKK7 198 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZNF57Q68EA5 555 aaPredicted RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 THOC7Q6I9Y2 204 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR5M10Q6IEU7 315 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 C8orf82Q6P1X6 216 aaPredicted RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 TRIM40Q6P9F5 258 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 FRRS1Q6ZNA5 592 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 YTHDF3Q7Z739 585 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 RBM23Q86U06 439 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ENTHD1Q8IYW4 607 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 PDIK1LQ8N165 341 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 TMEM251Q8N6I4 163 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 WDR31Q8NA23 367 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZNRF1Q8ND25 227 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 MDS2Q8NDY4 140 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 VN1R2Q8NFZ6 395 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR8K1Q8NGG5 319 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 SPPL2AQ8TCT8 520 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 SFXN5Q8TD22 340 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 GATAD1Q8WUU5 269 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZNRF4Q8WWF5 429 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 DYRK2Q92630 601 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 FLYWCH2Q96CP2 140 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 CMTM5Q96DZ9 223 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ST6GAL2Q96JF0 529 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 POM121L2Q96KW2 1035 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 RNF145Q96MT1 663 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 BDH2Q9BUT1 245 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 HES7Q9BYE0 225 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 UPF3AQ9H1J1 476 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 PORCNQ9H237 461 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 LIME1Q9H400 295 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 C6orf50Q9HD87 102 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ASCL3Q9NQ33 180 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 CIDEBQ9UHD4 219 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 RAB23Q9ULC3 237 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ING4Q9UNL4 249 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 MRPS18CQ9Y3D5 142 aaKnown RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 GOLT1BQ9Y3E0 138 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 FBXO7Q9Y3I1 522 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 WIF1Q9Y5W5 379 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 COL11A2P13942 1736 aaPredicted RBP3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 KIAA1210Q9ULL0 1709 aa3.3□□□□□ -1.88
RNU4-60P-201ENST00000517239 ANKRD30BQ9BXX2 1392 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 RAB3GAP2Q9H2M9 1393 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 ELP1O95163 1332 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 A0A1W2PR80 420 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 MEIOCA2RUB1 952 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 MSGN1A6NI15 193 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 OR5K4A6NMS3 321 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 DBX1A6NMT0 343 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 EFCAB7A8K855 629 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 HIDE1A8MVS5 230 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 E5RI56 91 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 SLCO1B7G3V0H7 640 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 H0Y980 276 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 H3BNX3 289 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 PLPP3O14495 311 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 ALOX12BO75342 701 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 C1QL1O75973 258 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 SNAP29O95721 258 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 PTTG1O95997 202 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 ORM1P02763 201 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 FGF1P05230 155 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 FCGR3AP08637 254 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 CALM1P0DP23 149 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 CALM2P0DP24 149 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 CALM3P0DP25 149 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 HSPD1P10809 573 aaKnown RBP3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 LIPCP11150 499 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 HSD17B1P14061 328 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 PVRP15151 417 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 ZNF12P17014 697 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 PRPS1L1P21108 318 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 TUFMP49411 452 aaKnown RBP3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 PLK1P53350 603 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 CRYBA2P53672 197 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 MFAP2P55001 183 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 CXCR4P61073 352 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 SP4Q02446 784 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 TLE4Q04727 773 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 CKAP4Q07065 602 aaKnown RBP3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 SLC10A2Q12908 348 aaPredicted RBP3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 TSPAN31Q12999 210 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 DYNC1I2Q13409 638 aaKnown RBP3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 NAB1Q13506 487 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 RAB31Q13636 194 aa3.29□□□□□ -1.88
RNU4-60P-201ENST00000517239 DPYSL3Q14195 570 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms