RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 TRBV4-1A0A0J9YWV2 114 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SH3PXD2BA1X283 911 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 FAM171A2A8MVW0 826 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 VSTM5A8MXK1 200 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 AHCYL1O43865 530 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 GADD45GO95257 159 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 CD14P08571 375 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 CELA3BP08861 270 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 NPR2P20594 1047 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 GPR4P46093 362 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 OMPP47874 163 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 GIPRP48546 466 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 PTDSS1P48651 473 aaKnown RBP11.08□□□□□ -0.64
CLCN3-210ENST00000515420 CD47Q08722 323 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 TRIM25Q14258 630 aaKnown RBP11.08□□□□□ -0.64
CLCN3-210ENST00000515420 EFNB3Q15768 340 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SWI5Q1ZZU3 235 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SLC36A2Q495M3 483 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 LCN8Q6JVE9 175 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 TRPM8Q7Z2W7 1104 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 MYPOPQ86VE0 399 aaPredicted RBP11.08□□□□□ -0.64
CLCN3-210ENST00000515420 ZDHHC21Q8IVQ6 265 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SKA3Q8IX90 412 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 ARIH2OSQ8N7S6 290 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SYT14Q8NB59 555 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 BCAS4Q8TDM0 211 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 FAM46AQ96IP4 442 aaKnown RBP11.08□□□□□ -0.64
CLCN3-210ENST00000515420 TSPAN32Q96QS1 320 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 RBP7Q96R05 134 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 CACNG6Q9BXT2 260 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SEC61A2Q9H9S3 476 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SIAEQ9HAT2 523 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 NOX3Q9HBY0 568 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 ZNF346Q9UL40 294 aaKnown RBP11.08□□□□□ -0.64
CLCN3-210ENST00000515420 AURKCQ9UQB9 309 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 SIGLEC7Q9Y286 467 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 PMF1-BGLAPU3KQ54 211 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 V9GYQ6 96 aa11.08□□□□□ -0.64
CLCN3-210ENST00000515420 B9A039 149 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 PTP4A3O75365 173 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 KRT36O76013 467 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 DIRAS1O95057 198 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 NDUFB2O95178 105 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 PTHP01270 115 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 IGHV4-39P01824 125 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 SERPINA5P05154 406 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 INHBBP09529 407 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 ZNF35P13682 527 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 RPL4P36578 427 aaKnown RBP11.07□□□□□ -0.64
CLCN3-210ENST00000515420 ACVR1BP36896 505 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 SERPINF1P36955 418 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 MAGEA2P43356 314 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 MYBPC1Q00872 1141 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 SPIBQ01892 262 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 HGFACQ04756 655 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 TOP3AQ13472 1001 aaPredicted RBP11.07□□□□□ -0.64
CLCN3-210ENST00000515420 SEC23BQ15437 767 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 GPR139Q6DWJ6 353 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 TMEM53Q6P2H8 277 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 SLC25A47Q6Q0C1 308 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 DNM1P46Q6ZS02 220 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 RINLQ6ZS11 566 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 FOXL2NBQ6ZUU3 175 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 SLC16A14Q7RTX9 510 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 FAM122BQ7Z309 247 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 ASB9Q96DX5 294 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 MAGIXQ9H6Y5 334 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 NRIP3Q9NQ35 241 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 TAS2R1Q9NYW7 299 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 GRHPRQ9UBQ7 328 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 SPEF1Q9Y4P9 236 aa11.07□□□□□ -0.64
CLCN3-210ENST00000515420 TCRBV5S2A0A599 114 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 UNC119BA6NIH7 251 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 XKRYO14609 159 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 SLC2A10O95528 541 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 APEHP13798 732 aaKnown RBP11.06□□□□□ -0.64
CLCN3-210ENST00000515420 ZNF26P17031 533 aaPredicted RBP11.06□□□□□ -0.64
CLCN3-210ENST00000515420 HOXB6P17509 224 aaKnown RBP11.06□□□□□ -0.64
CLCN3-210ENST00000515420 ATP6V1B2P21281 511 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 NR4A1P22736 598 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 FPR3P25089 353 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 SDHAP31040 664 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 IFNGR2P38484 337 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 GUCA1AP43080 201 aaPredicted RBP11.06□□□□□ -0.64
CLCN3-210ENST00000515420 HMGA2P52926 109 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 DSCR9P59020 149 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 RPS23P62266 143 aaKnown RBP11.06□□□□□ -0.64
CLCN3-210ENST00000515420 SNRPD2P62316 118 aaKnown RBP11.06□□□□□ -0.64
CLCN3-210ENST00000515420 PIGFQ07326 219 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 DAG1Q14118 895 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 RAB35Q15286 201 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 ADIPOQQ15848 244 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 CLEC12BQ2HXU8 276 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 MST1LQ2TV78 715 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 IGFN1Q86VF2 1251 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 DHFR2Q86XF0 187 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 MEX3DQ86XN8 651 aaKnown RBP11.06□□□□□ -0.64
CLCN3-210ENST00000515420 LINC00471Q8N535 108 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 OR52J3Q8NH60 311 aa11.06□□□□□ -0.64
CLCN3-210ENST00000515420 RSRC1Q96IZ7 334 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms