RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 FAM169BQ8N8A8 192 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 NOXO1Q8NFA2 376 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 ACOT11Q8WXI4 607 aaPredicted RBP9.94□□□□□ -0.82
VCAN-212ENST00000515397 PYURFQ96I23 114 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 GRIP2Q9C0E4 1043 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 TXNIPQ9H3M7 391 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 HIF3AQ9Y2N7 669 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 ADAM18Q9Y3Q7 739 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 FAM32AQ9Y421 112 aaKnown RBP9.94□□□□□ -0.82
VCAN-212ENST00000515397 PMF1-BGLAPU3KQ54 211 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 NSD1Q96L73 2696 aaPredicted RBP9.94□□□□□ -0.82
VCAN-212ENST00000515397 RAB36O95755 333 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 IGF2P01344 180 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 SCG5P05408 212 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 OR8G3PP0DMU2 310 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 NPR2P20594 1047 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 RPL4P36578 427 aaKnown RBP9.93□□□□□ -0.82
VCAN-212ENST00000515397 SLC9A3P48764 834 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 DAP3P51398 398 aaKnown RBP9.93□□□□□ -0.82
VCAN-212ENST00000515397 RPL27P61353 136 aaKnown RBP9.93□□□□□ -0.82
VCAN-212ENST00000515397 IQCCQ4KMZ1 466 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 SAMD4BQ5PRF9 694 aaKnown RBP9.93□□□□□ -0.82
VCAN-212ENST00000515397 RINLQ6ZS11 566 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 SLC16A14Q7RTX9 510 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 LRP11Q86VZ4 500 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 CDK20Q8IZL9 346 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 OR4F15Q8NGB8 312 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 NMD3Q96D46 503 aaKnown RBP9.93□□□□□ -0.82
VCAN-212ENST00000515397 NSL1Q96IY1 281 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 SORCS2Q96PQ0 1159 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 TSPAN32Q96QS1 320 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 GPA33Q99795 319 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 SYT3Q9BQG1 590 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 RHNO1Q9BSD3 238 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 GORASP2Q9H8Y8 452 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 UGT2A1Q9Y4X1 527 aa9.93□□□□□ -0.82
VCAN-212ENST00000515397 UBL3O95164 117 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 HEXAP06865 529 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 FAM157BP0CG42 384 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 T-ENOLP0DO92 83 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 ZNF35P13682 527 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 HSD17B1P14061 328 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 RHCEP18577 417 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 NR4A1P22736 598 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 ZNF84P51523 738 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 EFNA4P52798 201 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 ETFDHQ16134 617 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 ALKBH6Q3KRA9 238 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 C3orf36Q3SXR2 165 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 ZBED5Q49AG3 693 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 C1QTNF12Q5T7M4 302 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 SLC25A47Q6Q0C1 308 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 C16orf89Q6UX73 402 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 THSD4Q6ZMP0 1018 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 DNM1P46Q6ZS02 220 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 RNF113BQ8IZP6 322 aaKnown RBP9.92□□□□□ -0.82
VCAN-212ENST00000515397 RASD2Q96D21 266 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 POM121Q96HA1 1249 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 Q96M85 177 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 NSMCE2Q96MF7 247 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 KCNK17Q96T54 332 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 SEPHS2Q99611 448 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 DOK1Q99704 481 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 MRPL37Q9BZE1 423 aaKnown RBP9.92□□□□□ -0.82
VCAN-212ENST00000515397 RERGLQ9H628 205 aa9.92□□□□□ -0.82
VCAN-212ENST00000515397 BARX1Q9HBU1 254 aaPredicted RBP9.92□□□□□ -0.82
VCAN-212ENST00000515397 SAMD4AQ9UPU9 718 aaKnown RBP9.92□□□□□ -0.82
VCAN-212ENST00000515397 A0A1W2PRQ8 180 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 B9A039 149 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 INAFM1C9JVW0 142 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 LYNX1G3V0Z9 82 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 H7C417 338 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 PTP4A3O75365 173 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 PDE5AO76074 875 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 FARS2O95363 451 aaKnown RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 FAM107AO95990 144 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 F12P00748 615 aaPredicted RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 SEMG1P04279 462 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 SERPINA5P05154 406 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 IGFBP1P08833 259 aaPredicted RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 ADRA2AP08913 450 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 LYNX1P0DP58 116 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 ATP6V1B2P21281 511 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 CCNOP22674 350 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 APEX1P27695 318 aaKnown RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 OMPP47874 163 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 ERVS71-1P61550 626 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 SNRPD2P62316 118 aaKnown RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 SPIBQ01892 262 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 KRTAP1-1Q07627 177 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 PPP1R8Q12972 351 aaKnown RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 DGCR6Q14129 220 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 KRT72Q14CN4 511 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 MAD2L1BPQ15013 274 aaPredicted RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 GKAP1Q5VSY0 366 aaPredicted RBP9.91□□□□□ -0.82
VCAN-212ENST00000515397 CLEC2AQ6UVW9 174 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 UGT2A3Q6UWM9 527 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 TMPRSS11FQ6ZWK6 438 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 ZER1Q7Z7L7 766 aa9.91□□□□□ -0.82
VCAN-212ENST00000515397 ARIH2OSQ8N7S6 290 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms