RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DENND2DQ9H6A0 471 aaPredicted RBP7.7□□□□□ -1.18
NUP54-211ENST00000512151 KAT8Q9H7Z6 458 aaKnown RBP7.7□□□□□ -1.18
NUP54-211ENST00000512151 RNPEPL1Q9HAU8 725 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 DUSP22Q9NRW4 184 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 NECAP2Q9NVZ3 263 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 UBAP1Q9NZ09 502 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 DUSP13Q9UII6 198 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 TRAPPC4Q9Y296 219 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 INSIG2Q9Y5U4 225 aa7.7□□□□□ -1.18
NUP54-211ENST00000512151 TET2Q6N021 2002 aaPredicted RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 A0A1W2PPW3 197 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 ZC3H12DA2A288 527 aaKnown RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 C17orf100A8MU93 164 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 CLDN25C9JDP6 229 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 FOXH1O75593 365 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 TFPTP0C1Z6 253 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 UBTFL6P0CB48 400 aaPredicted RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 CD80P33681 288 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 GLRXP35754 106 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 ARR3P36575 388 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 PGM1P36871 562 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 APOBEC1P41238 236 aaKnown RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 CRATP43155 626 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 SLC7A2P52569 658 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 SLC35A1P78382 337 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 MXRA7P84157 204 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 ROR2Q01974 943 aaKnown RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 USP51Q70EK9 711 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 ABHD12BQ7Z5M8 362 aaPredicted RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 DEFB107AQ8IZN7 70 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 PGAM4Q8N0Y7 254 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 ANKFN1Q8N957 763 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 OR8J3Q8NGG0 315 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 OR52E2Q8NGJ4 325 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 OR10A6Q8NH74 314 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 ADAMTS15Q8TE58 950 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 XAGE5Q8WWM1 108 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 TMEM234Q8WY98 164 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 STACQ99469 402 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 NAA11Q9BSU3 229 aaPredicted RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 GAR1Q9NY12 217 aaKnown RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 TAAR3PQ9P1P4 343 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 ABCD2Q9UBJ2 740 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 FAF1Q9UNN5 650 aaPredicted RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 POLR3KQ9Y2Y1 108 aaPredicted RBP7.69□□□□□ -1.18
NUP54-211ENST00000512151 DOCK11Q5JSL3 2073 aa7.69□□□□□ -1.18
NUP54-211ENST00000512151 TMEM72A0PK05 275 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 PRORSD1PA6NEY8 169 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 EVPLLA8MZ36 301 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 K7EIL1 84 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 PIP5K1CO60331 668 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 FCMRO60667 390 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 EIF1BO60739 113 aaKnown RBP7.68□□□□□ -1.18
NUP54-211ENST00000512151 AKR7A3O95154 331 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 IGHMP01871 453 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 CHRM4P08173 479 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 MAKP20794 623 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 PPIBP23284 216 aaKnown RBP7.68□□□□□ -1.18
NUP54-211ENST00000512151 P2RY4P51582 365 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 DSTNP60981 165 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 PLAURQ03405 335 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 LIPEQ05469 1076 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 PAX8Q06710 450 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 FADDQ13158 208 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 CEACAM7Q14002 265 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 ARHGAP11BQ3KRB8 267 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 XP32Q5T750 250 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 BRD3OSQ6XYD6 125 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 NET1Q7Z628 596 aaPredicted RBP7.68□□□□□ -1.18
NUP54-211ENST00000512151 EPHX4Q8IUS5 362 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 RNF148Q8N7C7 305 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 RAB1CQ92928 201 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 MAL2Q969L2 176 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 ZG16BQ96DA0 208 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 CLPTM1LQ96KA5 538 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 CDRT15Q96T59 188 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 SDF2Q99470 211 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 DCLRE1BQ9H816 532 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 MOV10Q9HCE1 1003 aaKnown RBP7.68□□□□□ -1.18
NUP54-211ENST00000512151 HINT3Q9NQE9 182 aaKnown RBP7.68□□□□□ -1.18
NUP54-211ENST00000512151 DCAF16Q9NXF7 216 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 B3GNT2Q9NY97 397 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 CD300AQ9UGN4 299 aa7.68□□□□□ -1.18
NUP54-211ENST00000512151 ZNF346Q9UL40 294 aaKnown RBP7.68□□□□□ -1.18
NUP54-211ENST00000512151 SPIN1Q9Y657 262 aaPredicted RBP7.68□□□□□ -1.18
NUP54-211ENST00000512151 TRAV40A0A0B4J280 105 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 ISPDA4D126 451 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 DUXAA6NLW8 204 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 ENTPD5O75356 428 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 PPP1R3DO95685 299 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 MPIG6BO95866 241 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 CSTAP01040 98 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 HLA-HP01893 362 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 ZNF14P17017 642 aaPredicted RBP7.67□□□□□ -1.18
NUP54-211ENST00000512151 RYKP34925 604 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 MSX2P35548 267 aaPredicted RBP7.67□□□□□ -1.18
NUP54-211ENST00000512151 CLK1P49759 484 aaKnown RBP7.67□□□□□ -1.18
NUP54-211ENST00000512151 GSK3BP49841 420 aa7.67□□□□□ -1.18
NUP54-211ENST00000512151 PDCD1Q15116 288 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms