RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 OR5AN1Q8NGI8 311 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF420Q8TAQ5 688 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF398Q8TD17 642 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ANKRD9Q96BM1 317 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 OTULINQ96BN8 352 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TESCQ96BS2 214 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FBXL8Q96CD0 374 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PELI1Q96FA3 418 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CPNE2Q96FN4 548 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MAGEB18Q96M61 343 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 Q96M66 194 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 VSTM2LQ96N03 204 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 OR2V2Q96R30 315 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 VAT1Q99536 393 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MICU1Q9BPX6 476 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 AIF1LQ9BQI0 150 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PCGF1Q9BSM1 259 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 DDA1Q9BW61 102 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 BEX1Q9HBH7 125 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 NLE1Q9NVX2 485 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 EPHA6Q9UF33 1036 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ARL5AQ9Y689 179 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 V9GYY9 64 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 DMXL1Q9Y485 3027 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CHD5Q8TDI0 1954 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 KBTBD11-OT1A0A1B0GTJ5 212 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PPP1R2P9O14990 202 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 GYG2O15488 501 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 RAD51CO43502 376 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SNAP91O60641 907 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF205O95201 554 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 HIST1H2ABP04908 130 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 RHOCP08134 193 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SP9P0CG40 484 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 HIST1H2ADP20671 130 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 BCKDHBP21953 392 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ARRB2P32121 409 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ACVRL1P37023 503 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 GDNFP39905 211 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PMELP40967 661 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TNFSF10P50591 281 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 DGKQP52824 942 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ADPRHP54922 357 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TAS2R39P59534 338 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 DBPQ10586 325 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FZD5Q13467 585 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 NFATC4Q14934 902 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAM174BQ3ZCQ3 159 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 LINC01620Q4KN68 170 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 RSBN1Q5VWQ0 802 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAM90A2PQ658T7 463 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 GRHL2Q6ISB3 625 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 HACD2Q6Y1H2 254 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CYS1Q717R9 158 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 HIST3H2AQ7L7L0 130 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 NUFIP2Q7Z417 695 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PPP1R32Q7Z5V6 425 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PTOV1Q86YD1 416 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SPPL2CQ8IUH8 684 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TP53INP2Q8IXH6 220 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF611Q8N823 705 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 UBASH3BQ8TF42 649 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PINX1Q96BK5 328 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 C12orf43Q96C57 262 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ISOC1Q96CN7 298 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 FAF2Q96CS3 445 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MRPL53Q96EL3 112 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PDXPQ96GD0 296 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMEM56Q96MV1 263 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 PHB2Q99623 299 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 C1orf50Q9BV19 199 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 AMBRA1Q9C0C7 1298 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 NAA50Q9GZZ1 169 aaKnown RBP4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ING2Q9H160 280 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC22A11Q9NSA0 550 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 MAT2BQ9NZL9 334 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CLN8Q9UBY8 286 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF221Q9UK13 617 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 IKZF2Q9UKS7 526 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 SNX24Q9Y343 169 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 ZNF337Q9Y3M9 751 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 UGT2A1Q9Y4X1 527 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 TMEM56-RWDD3S4R434 201 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 CACNA1IQ9P0X4 2223 aa4.52□□□□□ -1.69
TRAPPC11-208ENST00000511955 A0A1B0GUS0 222 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 RNF222A6NCQ9 220 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 NPIPB6E9PJ23 425 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 LAMTOR5O43504 91 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 RAD1O60671 282 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SRPX2O60687 465 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 C2P06681 752 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CISD3P0C7P0 127 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 GZMHP20718 246 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 HPCAL1P37235 193 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 ARL4AP40617 200 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SLC6A8P48029 635 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 SOX2P48431 317 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 NR0B1P51843 470 aaKnown RBP4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CLDN18P56856 261 aa4.51□□□□□ -1.69
TRAPPC11-208ENST00000511955 CXADRP78310 365 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms