RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 OR1A2Q9Y585 309 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 MROH7-TTC4A0A0A0MT08 1334 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 MAP3K15Q6ZN16 1313 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 RTL1A6NKG5 1358 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ARHGEF10O15013 1369 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 KIAA0232Q92628 1395 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 TMEM2Q9UHN6 1383 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 CRB1P82279 1406 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PTPRUQ92729 1446 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 LRP6O75581 1613 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 COL22A1Q8NFW1 1626 aaPredicted RBP3.07□□□□□ -1.92
NUP54-209ENST00000510569 CAMTA1Q9Y6Y1 1673 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 ABCA3Q99758 1704 aa3.07□□□□□ -1.92
NUP54-209ENST00000510569 PXDNLA1KZ92 1463 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SMCO2A6NFE2 343 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 FBLL1A6NHQ2 334 aaKnown RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 NBR2O15453 112 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 RS1O15537 224 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 GATCO43716 136 aaKnown RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 NOL4O94818 638 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 ELP1O95163 1332 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SYNGR4O95473 234 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 ZMYM6O95789 1325 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 IFNA14P01570 189 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 HSPB1P04792 205 aaKnown RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 HMGN1P05114 100 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 APRTP07741 180 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 KRT7P08729 469 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CALM1P0DP23 149 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CALM2P0DP24 149 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CALM3P0DP25 149 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 RAB4AP20338 218 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CNR1P21554 472 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 PCMT1P22061 227 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CASP14P31944 242 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TGM4P49221 684 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SERPINB9P50453 376 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TPMTP51580 245 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 MAGOHP61326 146 aaKnown RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 CD47Q08722 323 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SIGLEC14Q08ET2 396 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 PJVKQ0ZLH3 352 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SMARCB1Q12824 385 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CDC20Q12834 499 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 P2RY14Q15391 338 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SYPL1Q16563 259 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 MICBQ29980 383 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SBK1Q52WX2 424 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 MARCH8Q5T0T0 291 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TIGD3Q6B0B8 471 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 FAM151BQ6UXP7 276 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SIGLEC15Q6ZMC9 328 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 ADAMTS13Q76LX8 1427 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 ITIH5Q86UX2 942 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SLC26A11Q86WA9 606 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SLC13A5Q86YT5 568 aaPredicted RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 C10orf67Q8IYJ2 551 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CLEC4FQ8N1N0 589 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TBC1D19Q8N5T2 526 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TMEM104Q8NE00 496 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 PROKR2Q8NFJ6 384 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 OR7G2Q8NG99 324 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 OR10H4Q8NGA5 316 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 NRGNQ92686 78 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TRIM9Q9C026 710 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 TOLLIPQ9H0E2 274 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CXXC4Q9H2H0 198 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TRIM45Q9H8W5 580 aaPredicted RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 Q9HAA7 133 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SLC40A1Q9NP59 571 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 DYRK4Q9NR20 520 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 PXMP2Q9NR77 195 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SMOXQ9NWM0 555 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TAS2R16Q9NYV7 291 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 IFNKQ9P0W0 207 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 SLC17A7Q9P2U7 560 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 P2RX2Q9UBL9 471 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 TUBGCP4Q9UGJ1 667 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 BCAP29Q9UHQ4 241 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 PITPNC1Q9UKF7 332 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 RIMS2Q9UQ26 1411 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 CSDC2Q9Y534 153 aaKnown RBP3.06□□□□□ -1.92
NUP54-209ENST00000510569 LRRC42Q9Y546 428 aa3.06□□□□□ -1.92
NUP54-209ENST00000510569 AK9Q5TCS8 1911 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 KDM3BQ7LBC6 1761 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 PIK3C2AO00443 1686 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 PLEKHG1Q9ULL1 1385 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 A0A1B0GVL5 298 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 RNF222A6NCQ9 220 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 ARGFXA6NJG6 315 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 SMIM23A6NLE4 172 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 E5RI56 91 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 LRRN3E7EW58 273 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 RNASEK-C17orf49H0YIS7 233 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 H0YJX3 145 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 SGK494L7N484 410 aa3.05□□□□□ -1.92
NUP54-209ENST00000510569 PGRMC1O00264 195 aaKnown RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 LIN7AO14910 233 aaPredicted RBP3.05□□□□□ -1.92
NUP54-209ENST00000510569 STX7O15400 261 aaKnown RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms