RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 NR0B1P51843 470 aaKnown RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 CDKN2DP55273 166 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SELENOTP62341 195 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TWF1Q12792 350 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TPBGQ13641 420 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 GTF2H2Q13888 395 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TAB1Q15750 504 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 CEACAM21Q3KPI0 293 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 EIPR1Q53HC9 387 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ARL13AQ5H913 290 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SAMD4BQ5PRF9 694 aaKnown RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TBC1D3GQ6DHY5 549 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 GTF2H2CQ6P1K8 395 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 BAIAP2L2Q6UXY1 529 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 IL17RELQ6ZVW7 336 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ASRGL1Q7L266 308 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 H2BFWTQ7Z2G1 175 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SKA3Q8IX90 412 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SLC35F6Q8N357 371 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SLC5A8Q8N695 610 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 GDPD1Q8N9F7 314 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 KIAA0895Q8NCT3 520 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 OR5L2Q8NGL0 311 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 FAM45AQ8TCE6 357 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 CNOT9Q92600 299 aaKnown RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 RPL3LQ92901 407 aaKnown RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 C8orf44Q96CB5 159 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TLCD1Q96CP7 247 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 CMTM7Q96FZ5 175 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 NARS2Q96I59 477 aaKnown RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 Q96MT0 163 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF75AQ96N20 296 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 OR5B12Q96R08 314 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF382Q96SR6 550 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 KLF6Q99612 283 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF184Q99676 751 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 LPAR4Q99677 370 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 DPH7Q9BTV6 452 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 NDUFAF3Q9BU61 184 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 OSBPL11Q9BXB4 747 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 BEX2Q9BXY8 128 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 DUSP16Q9BY84 665 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 MS4A7Q9GZW8 240 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 MMP28Q9H239 520 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 DCSTAMPQ9H295 470 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SLC28A3Q9HAS3 691 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 RANGRFQ9HD47 186 aaPredicted RBP4.04□□□□□ -1.76
NIPBL-206ENST00000509429 XPNPEP3Q9NQH7 507 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 GPR173Q9NS66 373 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ARL15Q9NXU5 204 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TFCP2L1Q9NZI6 479 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF224Q9NZL3 707 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 PEMTQ9UBM1 199 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 CLN8Q9UBY8 286 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 OR14J1Q9UGF5 321 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 KIF25Q9UIL4 384 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF221Q9UK13 617 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 SSR3Q9UNL2 185 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 TFR2Q9UP52 801 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 FBXO7Q9Y3I1 522 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 NUP188Q5SRE5 1749 aa4.04□□□□□ -1.76
NIPBL-206ENST00000509429 PALLDQ8WX93 1383 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ABCC12Q96J65 1359 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ZMYM6O95789 1325 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ECM29Q5VYK3 1845 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 TMEM129A0AVI4 362 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 OR6C68A6NDL8 312 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 IGLON5A6NGN9 336 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 MBD3L5A6NJ08 208 aaPredicted RBP4.03□□□□□ -1.76
NIPBL-206ENST00000509429 C5orf58C9J3I9 102 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ANKRD63C9JTQ0 380 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 CLIC1O00299 241 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 MRASO14807 208 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 DSCR3O14972 297 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 TCF21O43680 179 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 OR1F1O43749 312 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 AIREO43918 545 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 TPST1O60507 370 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ZNF780AO75290 641 aaPredicted RBP4.03□□□□□ -1.76
NIPBL-206ENST00000509429 RFPL2O75678 378 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 SLC25A12O75746 678 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 KRT33AO76009 404 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 IFNA17P01571 189 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 C1QCP02747 245 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ORM1P02763 201 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 NUDT17P0C025 328 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 NR2F6P10588 404 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ETFAP13804 333 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 ATP1B2P14415 290 aaPredicted RBP4.03□□□□□ -1.76
NIPBL-206ENST00000509429 HIST1H1BP16401 226 aaKnown RBP4.03□□□□□ -1.76
NIPBL-206ENST00000509429 CXCR1P25024 350 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 PCSK6P29122 969 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 FMO4P31512 558 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 DDOSTP39656 456 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 CRYBB2P43320 205 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 NPBWR1P48145 328 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 NAPAP54920 295 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 CDH11P55287 796 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 UCP3P55916 312 aa4.03□□□□□ -1.76
NIPBL-206ENST00000509429 EEFSECP57772 596 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms