RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 C20orf196Q8IYI0 205 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 CDK20Q8IZL9 346 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 LINC00471Q8N535 108 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 CLDN22Q8N7P3 220 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 OR8D4Q8NGM9 314 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 OR1K1Q8NGR3 316 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 FGFBP3Q8TAT2 258 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 GIPC3Q8TF64 312 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 HDAC2Q92769 488 aaKnown RBP7.55□□□□□ -1.2
SNCA-211ENST00000508895 GTPBP3Q969Y2 492 aaKnown RBP7.55□□□□□ -1.2
SNCA-211ENST00000508895 RASD2Q96D21 266 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 NMD3Q96D46 503 aaKnown RBP7.55□□□□□ -1.2
SNCA-211ENST00000508895 ADAD1Q96M93 576 aaKnown RBP7.55□□□□□ -1.2
SNCA-211ENST00000508895 Q96MF0 132 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 OR52D1Q9H346 318 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 EGLN3Q9H6Z9 239 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 GPR35Q9HC97 309 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 NRIP3Q9NQ35 241 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 ZNF701Q9NV72 531 aaPredicted RBP7.55□□□□□ -1.2
SNCA-211ENST00000508895 LAMP3Q9UQV4 416 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 CDH10Q9Y6N8 788 aa7.55□□□□□ -1.2
SNCA-211ENST00000508895 IGHV1-18A0A0C4DH31 117 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 TEX13CA0A0J9YWL9 993 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 OR6C65A6NJZ3 312 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 ZNF587BE7ETH6 402 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 ATP6V1G2-DDX39BF2Z307 99 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 RPL36A-HNRNPH2H7BZ11 118 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 H7C1C5 153 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 H7C1Q1 480 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 M0R3G1 203 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 GNGT2O14610 69 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 TRMUO75648 421 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 PPP1R3DO95685 299 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 BCL10O95999 233 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 IGHG1P01857 330 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 CD14P08571 375 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 IGFBP1P08833 259 aaPredicted RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 FASP25445 335 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 CD40P25942 277 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 MPGP29372 298 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 CALCRP30988 508 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 RPL4P36578 427 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 CSNK1A1P48729 337 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 RPL27P61353 136 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 LCN6P62502 163 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 ERVK-25P63136 954 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 ARF1P84077 181 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 ROR2Q01974 943 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 FMODQ06828 376 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 KRR1Q13601 381 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 HIST3H3Q16695 136 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 MST1LQ2TV78 715 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 CEACAM16Q2WEN9 425 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 TBRG1Q3YBR2 411 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 SMARCD3Q6STE5 483 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 KLHL17Q6TDP4 642 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 GPR137CQ8N3F9 429 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 MAPK1IP1LQ8NDC0 245 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 OR5K1Q8NHB7 308 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 MAGEE2Q8TD90 523 aaPredicted RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 GNPDA2Q8TDQ7 276 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 SMAP2Q8WU79 429 aaPredicted RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 TMEM54Q969K7 222 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 ZNF566Q969W8 418 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 SLC25A44Q96H78 314 aaPredicted RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 SAMD8Q96LT4 415 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 Q96M85 177 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 ZNF570Q96NI8 536 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 KCNK17Q96T54 332 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 FEVQ99581 238 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 TRAF4Q9BUZ4 470 aaPredicted RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 MRPL13Q9BYD1 178 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 GSX2Q9BZM3 304 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 GABARAPL1Q9H0R8 117 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 SEMA6AQ9H2E6 1030 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 CRLF2Q9HC73 371 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 ZNF224Q9NZL3 707 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 PDP1Q9P0J1 537 aaPredicted RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 UPB1Q9UBR1 384 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 MGAT4BQ9UQ53 548 aa7.54□□□□□ -1.2
SNCA-211ENST00000508895 FBN1P35555 2871 aaKnown RBP7.54□□□□□ -1.2
SNCA-211ENST00000508895 MALRD1Q5VYJ5 2156 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 NSD1Q96L73 2696 aaPredicted RBP7.53□□□□□ -1.2
SNCA-211ENST00000508895 IGKV1D-43A0A0B4J1Z2 117 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 ZNF726A6NNF4 738 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 CENPBD1B2RD01 187 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 BHLHE40O14503 412 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 IMPA2O14732 288 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 SMAD7O15105 426 aaKnown RBP7.53□□□□□ -1.2
SNCA-211ENST00000508895 LY6HO94772 140 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 SLC2A10O95528 541 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 LY6G6DO95868 133 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 TXNDC12O95881 172 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 IGHV4-39P01824 125 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 PAX1P15863 534 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 ACADSP16219 412 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 ZNF23P17027 643 aa7.53□□□□□ -1.2
SNCA-211ENST00000508895 PRKACGP22612 351 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms