RNA–Protein interactions for RNA: ENST00000508756.2

CHD1-205, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-205ENST00000508756 KIAA0087Q14695 138 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 KLHL38Q2WGJ6 581 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 MARCH8Q5T0T0 291 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 OR52H1Q8NGJ2 320 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 ZNF596Q8TC21 504 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 DTX3LQ8TDB6 740 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 PLEKHA8Q96JA3 519 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 RNF2Q99496 336 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 TMEM246Q9BRR3 403 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 DEFB127Q9H1M4 99 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 CDC42EP4Q9H3Q1 356 aaKnown RBP4.07□□□□□ -1.76
CHD1-205ENST00000508756 TPK1Q9H3S4 243 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 SRMSQ9H3Y6 488 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 NT5MQ9NPB1 228 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 IKZF2Q9UKS7 526 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 FRMPD3Q5JV73 1810 aa4.07□□□□□ -1.76
CHD1-205ENST00000508756 KIR2DL5BA0A0G2JN68 375 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 KIR2DL5BA0A0G2JPC4 375 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 LOC110117498-PIK3R3F6TDL0 507 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 AP2A1O95782 977 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 TMEM50AO95807 157 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 OTCP00480 354 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 ERCC1P07992 297 aaPredicted RBP4.06□□□□□ -1.76
CHD1-205ENST00000508756 MCF2P10911 925 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 ABOP16442 354 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 CPN2P22792 545 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 GYG1P46976 350 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 SLAQ13239 276 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 LY6G6FQ5SQ64 297 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 LRRC31Q6UY01 552 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 KIR2DL5AQ8N109 375 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 TPRX1Q8N7U7 411 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 KIR2DL5BQ8NHK3 375 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 SLC38A4Q969I6 547 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 UBE2E3Q969T4 207 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 CLCC1Q96S66 551 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 DNTTIP1Q9H147 329 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 CLMPQ9H6B4 373 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 HAUS4Q9H6D7 363 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 REEP4Q9H6H4 257 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 C8orf33Q9H7E9 229 aaPredicted RBP4.06□□□□□ -1.76
CHD1-205ENST00000508756 UGT1A10Q9HAW8 530 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 THUMPD1Q9NXG2 353 aaKnown RBP4.06□□□□□ -1.76
CHD1-205ENST00000508756 MTCH1Q9NZJ7 389 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 BFARQ9NZS9 450 aa4.06□□□□□ -1.76
CHD1-205ENST00000508756 NVLO15381 856 aaKnown RBP4.05□□□□□ -1.76
CHD1-205ENST00000508756 SS18L1O75177 396 aaPredicted RBP4.05□□□□□ -1.76
CHD1-205ENST00000508756 MED6O75586 246 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 KITLGP21583 273 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 BMI1P35226 326 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 GSSP48637 474 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 HADHBP55084 474 aaKnown RBP4.05□□□□□ -1.76
CHD1-205ENST00000508756 DUSP7Q16829 419 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 PLCXD3Q63HM9 321 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 SASS6Q6UVJ0 657 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 ZNF561Q8N587 486 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 CEP112Q8N8E3 955 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 OR4F6Q8NGB9 312 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 TMIGD2Q96BF3 282 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 EFHD2Q96C19 240 aaPredicted RBP4.05□□□□□ -1.76
CHD1-205ENST00000508756 CXorf40BQ96DE9 158 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 ZNF641Q96N77 438 aaPredicted RBP4.05□□□□□ -1.76
CHD1-205ENST00000508756 OR2AG1Q9H205 316 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 BLZF1Q9H2G9 400 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 XKR8Q9H6D3 395 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 CCNB1IP1Q9NPC3 277 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 CHRAC1Q9NRG0 131 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 AGPAT3Q9NRZ7 376 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 ZNF282Q9UDV7 671 aaPredicted RBP4.05□□□□□ -1.76
CHD1-205ENST00000508756 PEX16Q9Y5Y5 336 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 HEBP2Q9Y5Z4 205 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 COMMD3-BMI1R4GMX3 469 aa4.05□□□□□ -1.76
CHD1-205ENST00000508756 TCRBV9S1A1TA0A576 114 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 GABRR3A8MPY1 467 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 CLOCKO15516 846 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 PSTPIP1O43586 416 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 OXSR1O95747 527 aaPredicted RBP4.04□□□□□ -1.76
CHD1-205ENST00000508756 TGM6O95932 706 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 SRMP19623 302 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 GSTM3P21266 225 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 GTF2E2P29084 291 aaKnown RBP4.04□□□□□ -1.76
CHD1-205ENST00000508756 DDOSTP39656 456 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 CRYBB2P43320 205 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 CYTH1Q15438 398 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 RSPO1Q2MKA7 263 aaPredicted RBP4.04□□□□□ -1.76
CHD1-205ENST00000508756 KLHL40Q2TBA0 621 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 SOHLH1Q5JUK2 328 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 C1orf220Q5T0J3 134 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 UTS2BQ765I0 119 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 ACMSDQ8TDX5 336 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 FOPNLQ96NB1 174 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 CNN2Q99439 309 aaKnown RBP4.04□□□□□ -1.76
CHD1-205ENST00000508756 ANKRD60Q9BZ19 345 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 RAB34Q9BZG1 259 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 FBXO44Q9H4M3 255 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 STK38LQ9Y2H1 464 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 KCNIP3Q9Y2W7 256 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 KIF27Q86VH2 1401 aa4.04□□□□□ -1.76
CHD1-205ENST00000508756 IGLV4-60A0A075B6I1 120 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms