RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 SLC7A9P82251 487 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 SMARCB1Q12824 385 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 CUL2Q13617 745 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 PPP1R7Q15435 360 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 COA6Q5JTJ3 125 aaKnown RBP2.15□□□□□ -2.07
LSM6-205ENST00000507449 ANKRD26P1Q6NSI1 321 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 CTAGE6Q86UF2 777 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 C12orf56Q8IXR9 622 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 PDIK1LQ8N165 341 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 ZNF786Q8N393 782 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 EID2Q8N6I1 236 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 CEP112Q8N8E3 955 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 DUSP18Q8NEJ0 188 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 CCDC54Q8NEL0 328 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 OR7G2Q8NG99 324 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 RHEBL1Q8TAI7 183 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 CD300LFQ8TDQ1 290 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 STMN2Q93045 179 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 SMIM10Q96HG1 83 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 PKNOX2Q96KN3 472 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 TAAR1Q96RJ0 339 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 SH3GL3Q99963 347 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 CENPKQ9BS16 269 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 MRPL37Q9BZE1 423 aaKnown RBP2.15□□□□□ -2.07
LSM6-205ENST00000507449 KIAA1257Q9ULG3 409 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 ING4Q9UNL4 249 aa2.15□□□□□ -2.07
LSM6-205ENST00000507449 TRAV39A0A0B4J263 110 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 ZNF816-ZNF321PA0A0X1KG74 233 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 CIB4A0PJX0 185 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 ANKRD63C9JTQ0 380 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 TMX2-CTNND1H3BSU7 103 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 XKRYO14609 159 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 KMOO15229 486 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 EIF3HO15372 352 aaKnown RBP eCLIP2.14□□□□□ -2.07
LSM6-205ENST00000507449 CLOCKO15516 846 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 DFNA5O60443 496 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 EEDO75530 441 aaKnown RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 OR2J3O76001 311 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 GNAO1P09471 354 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 ZDHHC11BP0C7U3 371 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 TROVE2P10155 538 aaKnown RBP eCLIP2.14□□□□□ -2.07
LSM6-205ENST00000507449 ADRB3P13945 408 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 OMGP23515 440 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 PPOXP50336 477 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 SSR4P51571 173 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 KRTAP10-8P60410 259 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 NUTF2P61970 127 aaKnown RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 YWHAGP61981 247 aaKnown RBP eCLIP2.14□□□□□ -2.07
LSM6-205ENST00000507449 CCNA1P78396 465 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 HMGCS1Q01581 520 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 SLC25A11Q02978 314 aaKnown RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 KCTD19Q17RG1 926 aaPredicted RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 SOHLH1Q5JUK2 328 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 DUX4L9Q6RFH8 374 aaPredicted RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 METAP1DQ6UB28 335 aaPredicted RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 STRADAQ7RTN6 431 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 TTC5Q8N0Z6 440 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 Q8N976 141 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 ZNF596Q8TC21 504 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 PIK3IP1Q96FE7 263 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 CEP170P1Q96L14 293 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 TSSK3Q96PN8 268 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 PANX1Q96RD7 426 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 PLIN2Q99541 437 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 P2RX4Q99571 388 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 ECSITQ9BQ95 431 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 PLA2G2FQ9BZM2 168 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 TPK1Q9H3S4 243 aa2.14□□□□□ -2.07
LSM6-205ENST00000507449 ZNF223Q9UK11 482 aaPredicted RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 MRPS18BQ9Y676 258 aaKnown RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 MTCL1Q9Y4B5 1905 aaKnown RBP2.14□□□□□ -2.07
LSM6-205ENST00000507449 A0A0B4J2A0 478 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 TCP11X1B4DZS4 312 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 H0YHG0 523 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 CDC7O00311 574 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 CHST1O43916 411 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 DPM1O60762 260 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 AIFM1O95831 613 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 TLX1NBP0CAT3 122 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 AK4P27144 223 aaPredicted RBP2.13□□□□□ -2.07
LSM6-205ENST00000507449 NAA10P41227 235 aaPredicted RBP2.13□□□□□ -2.07
LSM6-205ENST00000507449 ECH1Q13011 328 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 SELENBP1Q13228 472 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 TSPO2Q5TGU0 170 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 RAET1LQ5VY80 246 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 CARD17Q5XLA6 110 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 ZNF493Q6ZR52 646 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 TMEM179Q6ZVK1 233 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 NCCRP1Q6ZVX7 275 aaPredicted RBP2.13□□□□□ -2.07
LSM6-205ENST00000507449 BBS5Q8N3I7 341 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 LIX1Q8N485 282 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 MREGQ8N565 214 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 C15orf56Q8N910 161 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 OR5B3Q8NH48 314 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 SLC7A13Q8TCU3 470 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 CXorf40AQ8TE69 158 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 ZFP90Q8TF47 636 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 CCDC126Q96EE4 140 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 CHAC1Q9BUX1 264 aa2.13□□□□□ -2.07
LSM6-205ENST00000507449 SHPKQ9UHJ6 478 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms