RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 PPP1R1CQ8WVI7 109 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 DVL3Q92997 716 aaPredicted RBP16.09■□□□□ 0.17
NUP54-205ENST00000507257 ARL11Q969Q4 196 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 GPR174Q9BXC1 333 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 TMEM74BQ9NUR3 256 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 WBP1LQ9NX94 342 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 LAMP5Q9UJQ1 280 aa16.09■□□□□ 0.17
NUP54-205ENST00000507257 NARSO43776 548 aaKnown RBP16.08■□□□□ 0.16
NUP54-205ENST00000507257 HNRNPA1P09651 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
NUP54-205ENST00000507257 CSF2RAP15509 400 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 ZBTB25P24278 435 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 MEF2DQ14814 521 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 NR0B2Q15466 257 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 ZNHIT3Q15649 155 aaPredicted RBP16.08■□□□□ 0.16
NUP54-205ENST00000507257 GUCA2BQ16661 112 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 FAHD2BQ6P2I3 314 aaPredicted RBP16.08■□□□□ 0.16
NUP54-205ENST00000507257 LYG2Q86SG7 212 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 SLC25A42Q86VD7 318 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 ZNF440Q8IYI8 595 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 OR10AC1Q8NH08 325 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 OR8S1Q8NH09 359 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 ZBTB8AQ96BR9 441 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 FAHD2AQ96GK7 314 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 SEC11CQ9BY50 192 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 ZFP57Q9NU63 452 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 MKL2Q9ULH7 1088 aa16.08■□□□□ 0.16
NUP54-205ENST00000507257 IGKV1D-16P01601 117 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 AMY2AP04746 511 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 SLC35E2P0CK97 266 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 FGL2Q14314 439 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 ARHGAP40Q5TG30 622 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 NUP54Q7Z3B4 507 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 ZDHHC22Q8N966 263 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 SLAIN1Q8ND83 568 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 TMEM52Q8NDY8 209 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 SLC30A7Q8NEW0 376 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 OR4E2Q8NGC2 313 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 OR52R1Q8NGF1 315 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 OR13C8Q8NGS7 320 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 MITD1Q8WV92 249 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 C3orf49Q96BT1 292 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 PDCD10Q9BUL8 212 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 ATG5Q9H1Y0 275 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 IKZF2Q9UKS7 526 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 TRBV6-7A0A0A0MS04 114 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 FOXS1O43638 330 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 CTSVO60911 334 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 CYB5AP00167 134 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 LINC00271P0C7V0 271 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 GRK6P43250 576 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 KIR3DL2P43630 455 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 GPR85P60893 370 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 TAF13Q15543 124 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 PHF19Q5T6S3 580 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 IL34Q6ZMJ4 242 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 TMED4Q7Z7H5 227 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 GALNT16Q8N428 558 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 INO80EQ8NBZ0 244 aaPredicted RBP16.07■□□□□ 0.16
NUP54-205ENST00000507257 THAP6Q8TBB0 222 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 DOK4Q8TEW6 326 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 PTX4Q96A99 478 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 SLC41A2Q96JW4 573 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 ASF1BQ9NVP2 202 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 THAP10Q9P2Z0 257 aaPredicted RBP16.07■□□□□ 0.16
NUP54-205ENST00000507257 ERVK-19Q9WJR5 959 aa16.07■□□□□ 0.16
NUP54-205ENST00000507257 NOP16Q9Y3C1 178 aaKnown RBP16.07■□□□□ 0.16
NUP54-205ENST00000507257 IGKV1D-42A0A075B6H8 117 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 MEIS3P1A6NDR6 274 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 FAM171A2A8MVW0 826 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 ZNF736B4DX44 427 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 F5H0A9 414 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 EIF1AYO14602 144 aaKnown RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 TACR3P29371 465 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 EIF1AXP47813 144 aaKnown RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 PRKXP51817 358 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 CXADRP78310 365 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 ZNF74Q16587 644 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 TMEM88Q6PEY1 159 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 DRAM2Q6UX65 266 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 GTPBP8Q8N3Z3 284 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 BPIFB2Q8N4F0 458 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 OR5AP2Q8NGF4 316 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 OR51A4Q8NGJ6 313 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 ANKRD9Q96BM1 317 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 ZNF707Q96C28 371 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 PIK3IP1Q96FE7 263 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 ZNF587Q96SQ5 575 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 PRRT1Q99946 306 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 TINAGL1Q9GZM7 467 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 DOCK9Q9BZ29 2069 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 TEX13DA0A0J9YY54 714 aaPredicted RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 NUDT21O43809 227 aaKnown RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 HLA-AP01891 365 aaKnown RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 PNMTP11086 282 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 TPT1P13693 172 aaKnown RBP16.06■□□□□ 0.16
NUP54-205ENST00000507257 FSTP19883 344 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 S1PR1P21453 382 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 PAX6P26367 422 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 PPICP45877 212 aa16.06■□□□□ 0.16
NUP54-205ENST00000507257 ATP1B3P54709 279 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms