RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 FFAR1O14842 300 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 CLPTM1O96005 669 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 IFNA14P01570 189 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 MMP7P09237 267 aaPredicted RBP12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 THRBP10828 461 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 MAKP20794 623 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 CDAP32320 146 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 CLRN1P58418 232 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 FHL1Q13642 323 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 LRRC23Q53EV4 343 aaPredicted RBP12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 FAM120AOSQ5T036 256 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 FAM166AQ6J272 317 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 SLC16A14Q7RTX9 510 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 VTCN1Q7Z7D3 282 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 MEX3DQ86XN8 651 aaKnown RBP12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 PHC2Q8IXK0 858 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 CPEB3Q8NE35 698 aaKnown RBP12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 SLC30A7Q8NEW0 376 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 OR2T12Q8NG77 320 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 TPD52L3Q96J77 140 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 TSPAN32Q96QS1 320 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 SHARPINQ9H0F6 387 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 RNF121Q9H920 327 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 CHODLQ9H9P2 273 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 MRGBPQ9NV56 204 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 RHCGQ9UBD6 479 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 MED31Q9Y3C7 131 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 UGT2A1Q9Y4X1 527 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 CAPN7Q9Y6W3 813 aa12.35□□□□□ -0.43
CDC42SE2-209ENST00000506419 CENPBD1B2RD01 187 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 J3KTA2 159 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 SLC2A10O95528 541 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 FAM157BP0CG42 384 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 NAT2P11245 290 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 ERVS71-1P61550 626 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 GALK2Q01415 458 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 C10orf128Q5T292 105 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 SLC25A47Q6Q0C1 308 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 LRRC18Q8N456 261 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 LRRC75AQ8NAA5 344 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 NOXO1Q8NFA2 376 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 YIPF5Q969M3 257 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 NABP1Q96AH0 204 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 C1orf159Q96HA4 380 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 MS4A5Q9H3V2 200 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 SIAEQ9HAT2 523 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 MAN2C1Q9NTJ4 1040 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 SLC7A8Q9UHI5 535 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 FBXL3Q9UKT7 428 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 ZNF346Q9UL40 294 aaKnown RBP12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 KCNS2Q9ULS6 477 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 ANK2Q01484 3957 aa12.34□□□□□ -0.43
CDC42SE2-209ENST00000506419 FBN3Q75N90 2809 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 MCIDASD6RGH6 385 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 M0R233 179 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 PHF1O43189 567 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 FARS2O95363 451 aaKnown RBP12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 ERCC1P07992 297 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 COX4I1P13073 169 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 IFI30P13284 250 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 UCP2P55851 309 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 SRSF2Q01130 221 aaKnown RBP12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 LIPEQ05469 1076 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 FMODQ06828 376 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 ST3GAL3Q11203 375 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 ALKBH6Q3KRA9 238 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 NRN1LQ496H8 165 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 C8orf82Q6P1X6 216 aaPredicted RBP12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 TMEM53Q6P2H8 277 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 TBPL2Q6SJ96 375 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 TSEN54Q7Z6J9 526 aaKnown RBP12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 TREML1Q86YW5 311 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 CLDN22Q8N7P3 220 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 RP9Q8TA86 221 aaKnown RBP12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 BPIFA2Q96DR5 249 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 SNX18Q96RF0 628 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 OR51B6Q9H340 312 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 TXNIPQ9H3M7 391 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 LPAR3Q9UBY5 353 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 HIF3AQ9Y2N7 669 aa12.33□□□□□ -0.44
CDC42SE2-209ENST00000506419 WNT9BO14905 357 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 SLC22A2O15244 555 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 MGRN1O60291 552 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 NCR1O76036 304 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 SCG5P05408 212 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 ZNF250P15622 560 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 APEX1P27695 318 aaKnown RBP12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 DAP3P51398 398 aaKnown RBP12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 ZNF84P51523 738 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 CHN2P52757 468 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 RPS23P62266 143 aaKnown RBP12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 MRPS34P82930 218 aaKnown RBP12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 SGCAQ16586 387 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 SLC36A2Q495M3 483 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 ALG10Q5BKT4 473 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 PABPC1L2AQ5JQF8 200 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 RGS7BPQ6MZT1 257 aaPredicted RBP12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 DPPA2Q7Z7J5 298 aa12.32□□□□□ -0.44
CDC42SE2-209ENST00000506419 IGFN1Q86VF2 1251 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms