RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 SLC17A2O00624 439 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 LILRB3O75022 631 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 UPK3AO75631 287 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 CYB5AP00167 134 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 AMY2AP04746 511 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 AGAP20933 346 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 PTNP21246 168 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 TACR3P29371 465 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 PPICP45877 212 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 SLC6A9P48067 706 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 CAPZA1P52907 286 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 RAB11BQ15907 218 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 LINC00114Q6XXX2 140 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 MTSS1LQ765P7 747 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 SLC16A13Q7RTY0 426 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 TMED4Q7Z7H5 227 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 NAA40Q86UY6 237 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 OR1J2Q8NGS2 313 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 OR2L8Q8NGY9 312 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 NUDCD2Q8WVJ2 157 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 RNF166Q96A37 237 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-208ENST00000506368 COX14Q96I36 57 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 GPX7Q96SL4 187 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-208ENST00000506368 ADAT1Q9BUB4 502 aaKnown RBP14.44□□□□□ -0.1
SCLT1-208ENST00000506368 MRPS30Q9NP92 439 aaKnown RBP14.44□□□□□ -0.1
SCLT1-208ENST00000506368 ACKR4Q9NPB9 350 aa14.44□□□□□ -0.1
SCLT1-208ENST00000506368 MKKSQ9NPJ1 570 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-208ENST00000506368 C19orf53Q9UNZ5 99 aaPredicted RBP14.44□□□□□ -0.1
SCLT1-208ENST00000506368 A0A087WV62 115 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 OR6C76A6NM76 312 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF729A6NN14 1252 aaPredicted RBP14.43□□□□□ -0.1
SCLT1-208ENST00000506368 GPR89AB7ZAQ6 455 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 MFNGO00587 321 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF208O43345 1280 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 GPR89BP0CG08 455 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 RCC1P18754 421 aaPredicted RBP14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ZBTB25P24278 435 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 POU3F4P49335 361 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ATP1B3P54709 279 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 PHF19Q5T6S3 580 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ADAMTSL4Q6UY14 1074 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 TMEM25Q86YD3 366 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 LINC01555Q8NAE3 123 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 MFSD9Q8NBP5 474 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 IRF7Q92985 503 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 MCHR2Q969V1 340 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 NMES1Q9C002 83 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ADAM19Q9H013 955 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 LPAR3Q9UBY5 353 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 DMRT1Q9Y5R6 373 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF736B4DX44 427 aaPredicted RBP14.43□□□□□ -0.1
SCLT1-208ENST00000506368 K7ESM1 405 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 C6P13671 934 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 MAOAP21397 527 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 IGFBP4P22692 258 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 PSMB6P28072 239 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 RABIFP47224 123 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 CX3CR1P49238 355 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 AKR1C2P52895 323 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 CLDN2P57739 230 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 PRPS1P60891 318 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 AKR1C1Q04828 323 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 EGR3Q06889 387 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 GFOD2Q3B7J2 385 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 TMEM244Q5VVB8 128 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 ZFP82Q8N141 532 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 COX18Q8N8Q8 333 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 MRPL43Q8N983 215 aaKnown RBP14.43□□□□□ -0.1
SCLT1-208ENST00000506368 OR6K6Q8NGW6 343 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 GAL3ST3Q96A11 431 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 FAM3DQ96BQ1 224 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 SEH1LQ96EE3 360 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 TAAR9Q96RI9 348 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 SLC17A9Q9BYT1 436 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 FRRS1LQ9P0K9 344 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 USP36Q9P275 1121 aaKnown RBP14.43□□□□□ -0.1
SCLT1-208ENST00000506368 KPTNQ9Y664 436 aa14.43□□□□□ -0.1
SCLT1-208ENST00000506368 A0A1B0GWA3 101 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 C4orf51C9J302 202 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 MAS1P04201 325 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 ZNF735P0CB33 412 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 APEHP13798 732 aaKnown RBP14.42□□□□□ -0.1
SCLT1-208ENST00000506368 GUCA2AQ02747 115 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 ELOCQ15369 112 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 PLEKHN1Q494U1 663 aaPredicted RBP14.42□□□□□ -0.1
SCLT1-208ENST00000506368 ULK3Q6PHR2 472 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 ERN2Q76MJ5 926 aaKnown RBP14.42□□□□□ -0.1
SCLT1-208ENST00000506368 BPIFB2Q8N4F0 458 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 DEFB123Q8N688 67 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 OR51D1Q8NGF3 324 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 OR8S1Q8NH09 359 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 MYLIPQ8WY64 445 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 NXPE3Q969Y0 559 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 SMIM8Q96KF7 97 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 TMPRSS5Q9H3S3 457 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 RHOFQ9HBH0 211 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 TMEM14AQ9Y6G1 99 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 CENPVL1A0A0U1RR11 272 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 OR4C45A6NMZ5 311 aa14.42□□□□□ -0.1
SCLT1-208ENST00000506368 NPIPB9F8W1W9 429 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms