RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 SLC36A2Q495M3 483 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 AGAP6Q5VW22 663 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 RPL13AP3Q6NVV1 102 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 ZNF544Q6NX49 715 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 DPY19L2P2Q6ZN68 376 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 ZER1Q7Z7L7 766 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 SPATA24Q86W54 205 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 ADGRG5Q8IZF4 528 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 GNPDA2Q8TDQ7 276 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 DHRS9Q9BPW9 319 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 KCNN2Q9H2S1 579 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 LAMP3Q9UQV4 416 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 POMPQ9Y244 141 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 ADAM18Q9Y3Q7 739 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 SAMHD1Q9Y3Z3 626 aaKnown RBP14.53□□□□□ -0.08
SNCA-209ENST00000506244 ATP23Q9Y6H3 246 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 OTOGQ6ZRI0 2925 aa14.53□□□□□ -0.08
SNCA-209ENST00000506244 ATP6V1G2-DDX39BF2Z307 99 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 GSC2O15499 205 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 ARHGEF9O43307 516 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 PTP4A3O75365 173 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 SLC2A10O95528 541 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 DANCRP0C864 163 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 APEHP13798 732 aaKnown RBP14.52□□□□□ -0.09
SNCA-209ENST00000506244 GSSP48637 474 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 PTDSS1P48651 473 aaKnown RBP14.52□□□□□ -0.09
SNCA-209ENST00000506244 MRPS34P82930 218 aaKnown RBP14.52□□□□□ -0.09
SNCA-209ENST00000506244 TSPAN31Q12999 210 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 C1orf94Q6P1W5 598 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 TMEM53Q6P2H8 277 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 PGBD2Q6P3X8 592 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 SLC16A14Q7RTX9 510 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 FAM122BQ7Z309 247 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 FBXL14Q8N1E6 418 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 OR4F15Q8NGB8 312 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 OR52L1Q8NGH7 329 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 OR4C15Q8NGM1 316 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 NEUROG1Q92886 237 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 NMD3Q96D46 503 aaKnown RBP14.52□□□□□ -0.09
SNCA-209ENST00000506244 CADM1Q9BY67 442 aaKnown RBP14.52□□□□□ -0.09
SNCA-209ENST00000506244 GRIP2Q9C0E4 1043 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 LRMDAQ9H2I8 198 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 C1orf198Q9H425 327 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 NRIP3Q9NQ35 241 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 B3GNT2Q9NY97 397 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 MOKQ9UQ07 419 aa14.52□□□□□ -0.09
SNCA-209ENST00000506244 TEX13CA0A0J9YWL9 993 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 ZNF503-AS2A6NEH8 195 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 CST1P01037 141 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 ZNF26P17031 533 aaPredicted RBP14.51□□□□□ -0.09
SNCA-209ENST00000506244 RAB1AP62820 205 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 FMODQ06828 376 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 MESTQ5EB52 335 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 ZNF620Q6ZNG0 422 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 DTX2Q86UW9 622 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 CANT1Q8WVQ1 401 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 IGFBPL1Q8WX77 278 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 GTPBP3Q969Y2 492 aaKnown RBP14.51□□□□□ -0.09
SNCA-209ENST00000506244 Q96M85 177 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 CHID1Q9BWS9 393 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 GSX2Q9BZM3 304 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 OR52D1Q9H346 318 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 SIAEQ9HAT2 523 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 SLC7A8Q9UHI5 535 aa14.51□□□□□ -0.09
SNCA-209ENST00000506244 PLCE1Q9P212 2302 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 PRSS37A4D1T9 235 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 E7EQL1 145 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 GNGT2O14610 69 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 TXNDC12O95881 172 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 PTHP01270 115 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 SOD3P08294 240 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 BMP4P12644 408 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 PAX1P15863 534 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 GIPRP48546 466 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 FABP6P51161 128 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 PIGFQ07326 219 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 MICAQ29983 383 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 PGGHGQ32M88 737 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 RFX4Q33E94 735 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 SHEQ5VZ18 495 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 DNM1P34Q6PK57 102 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 SLC25A47Q6Q0C1 308 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 B3GLCTQ6Y288 498 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 THSD4Q6ZMP0 1018 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 SKA3Q8IX90 412 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 MUC15Q8N387 334 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 NUP37Q8NFH4 326 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 OR9Q2Q8NGE9 314 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 NSMAFQ92636 917 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 TRMT61AQ96FX7 289 aaKnown RBP14.5□□□□□ -0.09
SNCA-209ENST00000506244 GPA33Q99795 319 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 TRAF4Q9BUZ4 470 aaPredicted RBP14.5□□□□□ -0.09
SNCA-209ENST00000506244 RNF121Q9H920 327 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 CCNB1IP1Q9NPC3 277 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 CBLN4Q9NTU7 201 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 ZNF224Q9NZL3 707 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 IL20RAQ9UHF4 553 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 CDH10Q9Y6N8 788 aa14.5□□□□□ -0.09
SNCA-209ENST00000506244 PRRC2AP48634 2157 aaKnown RBP14.49□□□□□ -0.09
SNCA-209ENST00000506244 IGHV2OR16-5A0A0B4J2B6 119 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms