RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 DCDC2Q9UHG0 476 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 SLC7A8Q9UHI5 535 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 IKZF2Q9UKS7 526 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 PACSIN2Q9UNF0 486 aaPredicted RBP4.41□□□□□ -1.7
CHD1-204ENST00000505982 MOKQ9UQ07 419 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 ARL2BPQ9Y2Y0 163 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 SHANK3Q9BYB0 1731 aa4.41□□□□□ -1.7
CHD1-204ENST00000505982 SLX4Q8IY92 1834 aa4.4□□□□□ -1.7
CHD1-204ENST00000505982 ARFGEF1Q9Y6D6 1849 aa4.4□□□□□ -1.7
CHD1-204ENST00000505982 OBSCNQ5VST9 7968 aa4.4□□□□□ -1.7
CHD1-204ENST00000505982 PPIAL4EA0A075B759 164 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 FAM168BA1KXE4 195 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 MBTPS2O43462 519 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 ATP5HO75947 161 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 LGI1O95970 557 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 SEMG1P04279 462 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 PPIAL4FP0DN26 164 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 TNNI1P19237 187 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 RANBP1P43487 201 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 GPM6AP51674 278 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 KCNJ2P63252 427 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 DR1Q01658 176 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 IL17AQ16552 155 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 KYAT1Q16773 422 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 CARD16Q5EG05 197 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 GPRC6AQ5T6X5 926 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 Q6ZN92 141 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 ZNF571Q7Z3V5 609 aaPredicted RBP4.4□□□□□ -1.71
CHD1-204ENST00000505982 TMEM179BQ7Z7N9 219 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 CDR2LQ86X02 465 aaPredicted RBP4.4□□□□□ -1.71
CHD1-204ENST00000505982 NUDCD3Q8IVD9 361 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 LYG1Q8N1E2 194 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 ACOT4Q8N9L9 421 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 SDR9C7Q8NEX9 313 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 KCNG3Q8TAE7 436 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 ZNF317Q96PQ6 595 aaPredicted RBP4.4□□□□□ -1.71
CHD1-204ENST00000505982 RIOK1Q9BRS2 568 aaKnown RBP4.4□□□□□ -1.71
CHD1-204ENST00000505982 NAT9Q9BTE0 207 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 FAM192AQ9GZU8 254 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 NEUROG2Q9H2A3 272 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 EHD1Q9H4M9 534 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 ZNF702PQ9H963 129 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 FOLH1BQ9HBA9 442 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 NKIRAS1Q9NYS0 192 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 CD274Q9NZQ7 290 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 ABCG2Q9UNQ0 655 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 BZW2Q9Y6E2 419 aaKnown RBP4.4□□□□□ -1.71
CHD1-204ENST00000505982 V9GY05 133 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 C1orf167Q5SNV9 1468 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 TNRC6CQ9HCJ0 1690 aaKnown RBP4.4□□□□□ -1.71
CHD1-204ENST00000505982 MROH5Q6ZUA9 1318 aa4.4□□□□□ -1.71
CHD1-204ENST00000505982 CACNA1SQ13698 1873 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 NHSQ6T4R5 1651 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 PVALEFA0A1B0GWK0 134 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 HEATR9A2RTY3 570 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 TCP11X1B4DZS4 312 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 E9PBE3 544 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 IGHV3-23P01764 117 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 KLK3P07288 261 aaPredicted RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 KRT16P08779 473 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 GIG44P09565 113 aaPredicted RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 TROVE2P10155 538 aaKnown RBP eCLIP4.39□□□□□ -1.71
CHD1-204ENST00000505982 MCF2P10911 925 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 GSSP48637 474 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 CCNG1P51959 295 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 OR5I1Q13606 314 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 RCN1Q15293 331 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 MICBQ29980 383 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 PRR30Q53SZ7 412 aaPredicted RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 OR2G6Q5TZ20 316 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 RNASEKQ6P5S7 137 aaKnown RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 UNQ9370/PRO34162Q6UXP9 181 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 LRRC74BQ6ZQY2 392 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 C19orf35Q6ZS72 473 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 BBS5Q8N3I7 341 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 KIF2BQ8N4N8 673 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 METTL13Q8N6R0 699 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 DRAXINQ8NBI3 349 aaPredicted RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 FAM81AQ8TBF8 368 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 DNAJA4Q8WW22 397 aaPredicted RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 MARC2Q969Z3 335 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 PLEKHA8Q96JA3 519 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 C12orf42Q96LP6 360 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 MRPL45Q9BRJ2 306 aaKnown RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 NICN1Q9BSH3 213 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 GPR61Q9BZJ8 451 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 ACTR6Q9GZN1 396 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 ANKRD19PQ9H560 264 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 SUDS3Q9H7L9 328 aaPredicted RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 NT5MQ9NPB1 228 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 FGFR1OP2Q9NVK5 253 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 VNN3Q9NY84 501 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 ADAM22Q9P0K1 906 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 BTNL2Q9UIR0 455 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 PEX16Q9Y5Y5 336 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 TP53BP1Q12888 1972 aaPredicted RBP4.39□□□□□ -1.71
CHD1-204ENST00000505982 PCDH11XQ9BZA7 1347 aa4.39□□□□□ -1.71
CHD1-204ENST00000505982 ITGB4P16144 1822 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms