RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 PLP1P60201 277 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ACTA2P62736 377 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ACTC1P68032 377 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 GBE1Q04446 702 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 TGM3Q08188 693 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 PPP1R7Q15435 360 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ZNF77Q15935 545 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 LY6G6FQ5SQ64 297 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 TMEM107Q6UX40 140 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ASCL5Q7RTU5 278 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 PSTKQ8IV42 348 aaKnown RBP2.13□□□□□ -2.07
CHD1-203ENST00000505657 OR4F6Q8NGB9 312 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 UBALD1Q8TB05 177 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 CD300LFQ8TDQ1 290 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ZNF721Q8TF20 911 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 PYROXD1Q8WU10 500 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 CENPKQ9BS16 269 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ZNF430Q9H8G1 570 aaPredicted RBP2.13□□□□□ -2.07
CHD1-203ENST00000505657 NT5MQ9NPB1 228 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ADAP2Q9NPF8 381 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 ZNF629Q9UEG4 869 aaPredicted RBP2.13□□□□□ -2.07
CHD1-203ENST00000505657 YTHDF2Q9Y5A9 579 aaKnown RBP2.13□□□□□ -2.07
CHD1-203ENST00000505657 PEX16Q9Y5Y5 336 aa2.13□□□□□ -2.07
CHD1-203ENST00000505657 A0A1B0GVI7 797 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 A0A1W2PPE3 182 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 TMEM150BA6NC51 233 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 PPP1R2P9O14990 202 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 CTDNEP1O95476 244 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 TMEM50AO95807 157 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 SERPIND1P05546 499 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 ZNF286BP0CG31 522 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 TROVE2P10155 538 aaKnown RBP eCLIP2.12□□□□□ -2.07
CHD1-203ENST00000505657 MCF2P10911 925 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 SLC2A5P22732 501 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 ATP5OP48047 213 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 ERVK-25P63136 954 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 AQP6Q13520 282 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 TGFBIQ15582 683 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 ALKBH6Q3KRA9 238 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 ZBED5Q49AG3 693 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 ABCA11PQ4W5N1 156 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 VAX1Q5SQQ9 334 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 LRRC74BQ6ZQY2 392 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 NCCRP1Q6ZVX7 275 aaPredicted RBP2.12□□□□□ -2.07
CHD1-203ENST00000505657 NIPA1Q7RTP0 329 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 PLA2G4DQ86XP0 818 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 C15orf56Q8N910 161 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 ZNF709Q8N972 641 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 TRPV1Q8NER1 839 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 SPATA4Q8NEY3 305 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 OR2L8Q8NGY9 312 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 SGK3Q96BR1 496 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 WFIKKN1Q96NZ8 548 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 PANX1Q96RD7 426 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 RIOK1Q9BRS2 568 aaKnown RBP2.12□□□□□ -2.07
CHD1-203ENST00000505657 GABARAPL3Q9BY60 117 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 NIPAL2Q9H841 368 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 NOX3Q9HBY0 568 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 PSMC3IPQ9P2W1 217 aaPredicted RBP2.12□□□□□ -2.07
CHD1-203ENST00000505657 NUP214P35658 2090 aaPredicted RBP2.12□□□□□ -2.07
CHD1-203ENST00000505657 MN1Q10571 1320 aaPredicted RBP2.12□□□□□ -2.07
CHD1-203ENST00000505657 FANCIQ9NVI1 1328 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 IGSF9BQ9UPX0 1349 aa2.12□□□□□ -2.07
CHD1-203ENST00000505657 CEMIPQ8WUJ3 1361 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 CIB4A0PJX0 185 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 COLCA2A8K830 154 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 DNALI1O14645 258 aaPredicted RBP2.11□□□□□ -2.07
CHD1-203ENST00000505657 KLHL41O60662 606 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 C1orf105O95561 183 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 OMGP23515 440 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 ATP5C1P36542 298 aaKnown RBP2.11□□□□□ -2.07
CHD1-203ENST00000505657 FDFT1P37268 417 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 CRYBB2P43320 205 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 GPR6P46095 362 aaPredicted RBP2.11□□□□□ -2.07
CHD1-203ENST00000505657 SUB1P53999 127 aaKnown RBP eCLIP2.11□□□□□ -2.07
CHD1-203ENST00000505657 CDH6P55285 790 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 KCNJ2P63252 427 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 SHHQ15465 462 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 MRPL23Q16540 153 aaKnown RBP2.11□□□□□ -2.07
CHD1-203ENST00000505657 DGUOKQ16854 277 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 TTLL9Q3SXZ7 439 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 XKR7Q5GH72 579 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 COA6Q5JTJ3 125 aaKnown RBP2.11□□□□□ -2.07
CHD1-203ENST00000505657 CARD17Q5XLA6 110 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 LRRC66Q68CR7 880 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 TRIM40Q6P9F5 258 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 METAP1DQ6UB28 335 aaPredicted RBP2.11□□□□□ -2.07
CHD1-203ENST00000505657 STPG2Q8N412 459 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 CCDC148Q8NFR7 591 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 PLPPR1Q8TBJ4 325 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 FRZBQ92765 325 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 MED8Q96G25 268 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 OR8B4Q96RC9 309 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 ECSITQ9BQ95 431 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 TMEM59Q9BXS4 323 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 RAB20Q9NX57 234 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 ZNF222Q9UK12 451 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 PACSIN2Q9UNF0 486 aaPredicted RBP2.11□□□□□ -2.07
CHD1-203ENST00000505657 TMED5Q9Y3A6 229 aa2.11□□□□□ -2.07
CHD1-203ENST00000505657 GAKO14976 1311 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms