RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 COL8A2P25067 703 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 GIFP27352 417 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 YAP1P46937 504 aaKnown RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 MIDNQ504T8 468 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 LRRC23Q53EV4 343 aaPredicted RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 COQ5Q5HYK3 327 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 INTS11Q5TA45 600 aaKnown RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 FAM166AQ6J272 317 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 NANOGNBQ7Z5D8 188 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 VTCN1Q7Z7D3 282 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 IGFN1Q86VF2 1251 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 TREML1Q86YW5 311 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 CCDC36Q8IYA8 594 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 LRRC75AQ8NAA5 344 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 RBM15BQ8NDT2 890 aaKnown RBP11.26□□□□□ -0.61
DDX41-204ENST00000504807 NOXO1Q8NFA2 376 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 TMEM239Q8WW34 195 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 YIPF5Q969M3 257 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 NABP1Q96AH0 204 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 ECSITQ9BQ95 431 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 OR51B6Q9H340 312 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 B3GAT2Q9NPZ5 323 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 RHCGQ9UBD6 479 aa11.26□□□□□ -0.61
DDX41-204ENST00000504807 KMT2CQ8NEZ4 4911 aaKnown RBP11.25□□□□□ -0.61
DDX41-204ENST00000504807 LOC100289279A0A1B0GTE1 492 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 UBL3O95164 117 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 OR5F1O95221 314 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 RAB36O95755 333 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 BCL10O95999 233 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 SERPINA5P05154 406 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 TACSTD2P09758 323 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 FAM157BP0CG42 384 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 NAT2P11245 290 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 KDELR2P33947 212 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 GLRXP35754 106 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 ZNF133P52736 654 aaPredicted RBP11.25□□□□□ -0.61
DDX41-204ENST00000504807 TAS2R41P59536 307 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 ACTG1P63261 375 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 C8orf82Q6P1X6 216 aaPredicted RBP11.25□□□□□ -0.61
DDX41-204ENST00000504807 PIWIL3Q7Z3Z3 882 aaKnown RBP11.25□□□□□ -0.61
DDX41-204ENST00000504807 SLC15A3Q8IY34 581 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 ZNF786Q8N393 782 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 CPEB3Q8NE35 698 aaKnown RBP11.25□□□□□ -0.61
DDX41-204ENST00000504807 LIPHQ8WWY8 451 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 SGTBQ96EQ0 304 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 SNX18Q96RF0 628 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 RAB1BQ9H0U4 201 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 MOV10Q9HCE1 1003 aaKnown RBP11.25□□□□□ -0.61
DDX41-204ENST00000504807 DYNLRB1Q9NP97 96 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 ARGLU1Q9NWB6 273 aaPredicted RBP11.25□□□□□ -0.61
DDX41-204ENST00000504807 CMAHPQ9Y471 501 aa11.25□□□□□ -0.61
DDX41-204ENST00000504807 BBIP1A8MTZ0 92 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 NME4O00746 187 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 MGRN1O60291 552 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 PRSS23O95084 383 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 SCG5P05408 212 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 VIMP08670 466 aaKnown RBP11.24□□□□□ -0.61
DDX41-204ENST00000504807 OR8G3PP0DMU2 310 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 TROVE2P10155 538 aaKnown RBP eCLIP11.24□□□□□ -0.61
DDX41-204ENST00000504807 ACADSP16219 412 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 RBM34P42696 430 aaKnown RBP11.24□□□□□ -0.61
DDX41-204ENST00000504807 MAGEB1P43366 347 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 GZMKP49863 264 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 CCNIQ14094 377 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 IQCCQ4KMZ1 466 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 TBPL2Q6SJ96 375 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 MICU2Q8IYU8 434 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 LRRC18Q8N456 261 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 SLC30A7Q8NEW0 376 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 IL17RDQ8NFM7 739 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 UBASH3BQ8TF42 649 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 NEU4Q8WWR8 484 aaPredicted RBP11.24□□□□□ -0.61
DDX41-204ENST00000504807 TPD52L3Q96J77 140 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 CCDC134Q9H6E4 229 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 INIPQ9NRY2 104 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 REV1Q9UBZ9 1251 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 RYR3Q15413 4870 aa11.24□□□□□ -0.61
DDX41-204ENST00000504807 SYNGR3O43761 229 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 RP2O75695 350 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 TGFAP01135 160 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 IGHG1P01857 330 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 APEX1P27695 318 aaKnown RBP11.23□□□□□ -0.61
DDX41-204ENST00000504807 WNT5AP41221 380 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 CLRN1P58418 232 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 TOP3AQ13472 1001 aaPredicted RBP11.23□□□□□ -0.61
DDX41-204ENST00000504807 PRR31Q5SQ13 230 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 C10orf128Q5T292 105 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 OTPQ5XKR4 325 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 ZNF101Q8IZC7 436 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 OR2T12Q8NG77 320 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 RASSF5Q8WWW0 418 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 NARFLQ9H6Q4 476 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 MYOZ1Q9NP98 299 aaPredicted RBP11.23□□□□□ -0.61
DDX41-204ENST00000504807 BAG5Q9UL15 447 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 ZNF346Q9UL40 294 aaKnown RBP11.23□□□□□ -0.61
DDX41-204ENST00000504807 HIF3AQ9Y2N7 669 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 CAPN7Q9Y6W3 813 aa11.23□□□□□ -0.61
DDX41-204ENST00000504807 LOC100509620A0A075B734 347 aa11.22□□□□□ -0.61
DDX41-204ENST00000504807 TRAV27A0A087WT01 109 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms