RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 SNX18Q96RF0 628 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 TSSK6Q9BXA6 273 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC17A5Q9NRA2 495 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 TBC1D23Q9NUY8 699 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF226Q9NYT6 803 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 KIF17Q9P2E2 1029 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 OAZ3Q9UMX2 235 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 POFUT2Q9Y2G5 429 aa10.44□□□□□ -0.74
PDLIM5-208ENST00000504489 CASKO14936 926 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 GOSR1O95249 250 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 SOX14O95416 240 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 IGFBP1P08833 259 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 CDH2P19022 906 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 CRYGSP22914 178 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 PAX7P23759 505 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 CDKN2AP42771 156 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF84P51523 738 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 MYBPC1Q00872 1141 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 TBRG1Q3YBR2 411 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC36A3Q495N2 470 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 CLEC12AQ5QGZ9 265 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 PTCHD4Q6ZW05 846 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 CCDC36Q8IYA8 594 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 PARP8Q8N3A8 854 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 WDR31Q8NA23 367 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 ICA1LQ8NDH6 482 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 OR2T33Q8NG76 320 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 TEX47Q8TBZ9 253 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 MUCL1Q96DR8 90 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 FOXB1Q99853 325 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 NELFAQ9H3P2 528 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 OBP2BQ9NPH6 170 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 PAPOLBQ9NRJ5 636 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 VSX1Q9NZR4 365 aaPredicted RBP10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 AMDHD2Q9Y303 409 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC25A15Q9Y619 301 aa10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 ASH1LQ9NR48 2969 aaKnown RBP10.43□□□□□ -0.74
PDLIM5-208ENST00000504489 ARPC4-TTLL3A0A0A6YYG9 625 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 IGKV1D-43A0A0B4J1Z2 117 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 SAC3D1A6NKF1 404 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 H3BN98 237 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 MGRN1O60291 552 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 SNRPBP14678 240 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 HIST1H1CP16403 213 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 NOS3P29474 1203 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 HOXC12P31275 282 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 GIPRP48546 466 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 ESRRGP62508 458 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 ELF3P78545 371 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 PPP2R2BQ00005 443 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 CDK5Q00535 292 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 FMODQ06828 376 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 PPA1Q15181 289 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 NRN1LQ496H8 165 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF362Q5T0B9 420 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 HIST2H2BCQ6DN03 193 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC27A4Q6P1M0 643 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF813Q6ZN06 617 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 ZNF295-AS1Q8N0V1 137 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 OR4Q3Q8NH05 313 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 C14orf79Q96F83 325 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 ZC3HAV1LQ96H79 300 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 RBM4BQ9BQ04 359 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 RBM4Q9BWF3 364 aaKnown RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 NGBQ9NPG2 151 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 KRT84Q9NSB2 600 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 TMEM38BQ9NVV0 291 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 ENOPH1Q9UHY7 261 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 TMEFF2Q9UIK5 374 aaPredicted RBP10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 AKAP6Q13023 2319 aa10.42□□□□□ -0.74
PDLIM5-208ENST00000504489 A0A096LPE4 126 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 A0A1W2PPZ6 126 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 FAM221AA4D161 298 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 H7C1C5 153 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC2A10O95528 541 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 BAG2O95816 211 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 WNT11O96014 354 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 RENP00797 406 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 POU1F1P28069 291 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 GRK5P34947 590 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 CRISP1P54107 249 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 LCN6P62502 163 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 MRPS34P82930 218 aaKnown RBP10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 GINS1Q14691 196 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 PGGHGQ32M88 737 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 HIKESHIQ53FT3 197 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC35F1Q5T1Q4 408 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 ACSM5Q6NUN0 579 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 LEG1Q6P5S2 330 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 KLHL24Q6TFL4 600 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 SEZ6L2Q6UXD5 910 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 TREML4Q6UXN2 200 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 FOXL2NBQ6ZUU3 175 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 JAZF1Q86VZ6 243 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 WFDC8Q8IUA0 241 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 SLC22A24Q8N4F4 322 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 NPEPL1Q8NDH3 523 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 OR52E2Q8NGJ4 325 aa10.41□□□□□ -0.74
PDLIM5-208ENST00000504489 OR4K13Q8NH42 304 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms