RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 OR6T1Q8NGN1 323 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR2A12Q8NGT7 310 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 BBS10Q8TAM1 723 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ZNF417Q8TAU3 575 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 UBA3Q8TBC4 463 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 MYEOVQ96EZ4 313 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 C1orf147Q96MC9 270 aaPredicted RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 ZNF558Q96NG5 402 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 KCNA7Q96RP8 456 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 NEU1Q99519 415 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PLK3Q9H4B4 646 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SEC61A2Q9H9S3 476 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ACER3Q9NUN7 267 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 DNAJC27Q9NZQ0 273 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 NCDNQ9UBB6 729 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 VAX2Q9UIW0 290 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 GNG8Q9UK08 70 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 RCE1Q9Y256 329 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 IGKV3D-15A0A087WSY6 115 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 COLCA2A8K830 154 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ALG1L2C9J202 215 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 BHLHE40O14503 412 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TNFRSF13BO14836 293 aaPredicted RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 DLEU1O43261 78 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PLPP2O43688 288 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TSPAN3O60637 253 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PRKRAO75569 313 aaKnown RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 PRAMEF12O95522 483 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 VIPP01282 170 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TACSTD2P09758 323 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 AKAIN1P0CW23 69 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ELK1P19419 428 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 EPHA2P29317 976 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 CCKBRP32239 447 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SLC11A1P49279 550 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PPT1P50897 306 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SLC16A1P53985 500 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PRR5P85299 388 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SPOCK1Q08629 439 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PLA2G7Q13093 441 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 KLF9Q13886 244 aaPredicted RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 JOSD1Q15040 202 aaPredicted RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 UGT8Q16880 541 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 COX19Q49B96 90 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TMEM164Q5U3C3 297 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 FBXL22Q6P050 247 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ZNF574Q6ZN55 896 aaPredicted RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 GRINAQ7Z429 371 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ACOT1Q86TX2 421 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 APCDD1Q8J025 514 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ZNF511Q8NB15 262 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 CCDC54Q8NEL0 328 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SDR9C7Q8NEX9 313 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR13C8Q8NGS7 320 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 DTD1Q8TEA8 209 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 HIST1H2BAQ96A08 127 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 MOAP1Q96BY2 351 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 C5orf34Q96MH7 638 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR5B2Q96R09 309 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ABHD1Q96SE0 405 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TMEM185BQ9H7F4 350 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PLEKHA2Q9HB19 425 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PRM3Q9NNZ6 103 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TMEM100Q9NV29 134 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 NLGN3Q9NZ94 848 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SLAMF8Q9P0V8 285 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PIPOXQ9P0Z9 390 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 WNT16Q9UBV4 365 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TP53TG3Q9ULZ0 132 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SNX11Q9Y5W9 270 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 A0A087WWC5 75 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TMEM269A0A1B0GVZ9 245 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 LRIT2A6NDA9 550 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SPDEFO95238 335 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 FGBP02675 491 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 CD3GP09693 182 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TMEM11P17152 192 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PSMB6P28072 239 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 BDKRB2P30411 391 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 SNCAP37840 140 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 HTR5AP47898 357 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 HTR6P50406 440 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 CRISP3P54108 245 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 CDK5Q00535 292 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ZNF763Q0D2J5 394 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 KRTCAP3Q53RY4 240 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 RAB6CQ53S08 254 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ACTBL2Q562R1 376 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 C9orf152Q5JTZ5 239 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 TMEM69Q5SWH9 247 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 PRAMEF17Q5VTA0 474 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 METRNLQ641Q3 311 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OR10K2Q6IF99 312 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 OPN5Q6U736 354 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 IGFL3Q6UXB1 125 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 ZNF852Q6ZMS4 543 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 MTSS1LQ765P7 747 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 VTCN1Q7Z7D3 282 aa2.53□□□□□ -2
NEDD4-204ENST00000503468 CIR1Q86X95 450 aaPredicted RBP2.53□□□□□ -2
NEDD4-204ENST00000503468 ZDHHC22Q8N966 263 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms