RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TBL1XO60907 577 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SERF1AO75920 110 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ERLIN2O94905 339 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CCNB2O95067 398 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SCELO95171 688 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 VAPBO95292 243 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 C1orf105O95561 183 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 TSPAN13O95857 204 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 HSPB1P04792 205 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 IFNW1P05000 195 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 C2P06681 752 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 STSP08842 583 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR8U8P0C7N1 319 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 POLR2EP19388 210 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PSMB1P20618 241 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 IL32P24001 234 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 IL12BP29460 328 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PCK1P35558 622 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CFHR2P36980 270 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 TNFSF9P41273 254 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CRATP43155 626 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC26A2P50443 739 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 KPNA2P52292 529 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 EFNA3P52797 238 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 BLVRAP53004 296 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PLTPP55058 493 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 DIO3P55073 304 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SKP1P63208 163 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CTAG1AP78358 180 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CSNK1G2P78368 415 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 TLE4Q04727 773 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF33AQ06730 810 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ORC2Q13416 577 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR5I1Q13606 314 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 MAPRE2Q15555 327 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 DUSP7Q16829 419 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR2B11Q5JQS5 317 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PPM1LQ5SGD2 360 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 LY6G6FQ5SQ64 297 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 RSBN1Q5VWQ0 802 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PTRHD1Q6GMV3 140 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR52E8Q6IFG1 317 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 FAM199XQ6PEV8 388 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SPESP1Q6UW49 350 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CXCL17Q6UXB2 119 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 TFAP2EQ6VUC0 442 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ASCL4Q6XD76 172 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 Q6ZSR3 168 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC35D2Q76EJ3 337 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ARCQ7LC44 396 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 BHLHA15Q7RTS1 189 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 FAM122BQ7Z309 247 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 LRRC8AQ8IWT6 810 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CEND1Q8N111 149 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR10H4Q8NGA5 316 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 OR52H1Q8NGJ2 320 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CA5BP1Q8WTZ4 195 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PYROXD1Q8WU10 500 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 C17orf50Q8WW18 174 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CAPSLQ8WWF8 208 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CACNG8Q8WXS5 425 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ECHDC3Q96DC8 303 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SEC22AQ96IW7 307 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CELF6Q96J87 481 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 KCNA7Q96RP8 456 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ATP5SQ99766 215 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 TMEM246Q9BRR3 403 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 BBS2Q9BXC9 721 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 YTHDF1Q9BYJ9 559 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PRRG3Q9BZD7 231 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 CHIAQ9BZP6 476 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 UCK2Q9BZX2 261 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ACTR3CQ9C0K3 210 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 NMUR2Q9GZQ4 415 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 PIGUQ9H490 435 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SAMSN1Q9NSI8 373 aaKnown RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 IL20Q9NYY1 176 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 UXTQ9UBK9 157 aaPredicted RBP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF229Q9UJW7 825 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 GGA2Q9UJY4 613 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 SLC22A14Q9Y267 594 aa1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 AQRO60306 1485 aaKnown RBP eCLIP1.75□□□□□ -2.13
HMGB1P35-201ENST00000503360 LRRK1Q38SD2 2015 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 A0A1B0GUS0 222 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 A0A1W2PRF3 423 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 A0A1W2PRM7 423 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 ZNF705EA8MWA4 302 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 SULT2B1O00204 365 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 CDC7O00311 574 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 RFXANKO14593 260 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 HSD17B6O14756 317 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 XRCC2O43543 280 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 UGT1A9O60656 530 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LYPLA1O75608 230 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LYPD3O95274 346 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 LCA5LO95447 670 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 FADS2O95864 444 aaKnown RBP1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 IGHV3-23P01764 117 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 RPN2P04844 631 aa1.74□□□□□ -2.13
HMGB1P35-201ENST00000503360 FGF1P05230 155 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms