RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 SLC2A10O95528 541 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 TGFAP01135 160 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 IFNA2P01563 188 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 HPXP02790 462 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 TSPAN19P0C672 248 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 FAM157BP0CG42 384 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 ACADSP16219 412 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 COL8A2P25067 703 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 CDAP32320 146 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 RBM34P42696 430 aaKnown RBP13.96□□□□□ -0.18
SCLT1-204ENST00000503215 ERVS71-1P61550 626 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 RIN1Q13671 783 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 ALKBH6Q3KRA9 238 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 ELFN2Q5R3F8 820 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 FAM166AQ6J272 317 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 VTCN1Q7Z7D3 282 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 PHC2Q8IXK0 858 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 LRRC18Q8N456 261 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 CLDN22Q8N7P3 220 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 SLC30A7Q8NEW0 376 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 NOXO1Q8NFA2 376 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 OR2T12Q8NG77 320 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 SPATA3Q8NHX4 192 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 BCAS4Q8TDM0 211 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 HDAC2Q92769 488 aaKnown RBP13.96□□□□□ -0.18
SCLT1-204ENST00000503215 NMD3Q96D46 503 aaKnown RBP13.96□□□□□ -0.18
SCLT1-204ENST00000503215 TSPAN32Q96QS1 320 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 SNX18Q96RF0 628 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 DENND2DQ9H6A0 471 aaPredicted RBP13.96□□□□□ -0.18
SCLT1-204ENST00000503215 GID8Q9NWU2 228 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 RHCGQ9UBD6 479 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 DUSP13Q9UII6 198 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 SPEF1Q9Y4P9 236 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 UGT2A1Q9Y4X1 527 aa13.96□□□□□ -0.18
SCLT1-204ENST00000503215 A0A1W2PRG6 482 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 J3KTA2 159 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 M0R233 179 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 PHF1O43189 567 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-204ENST00000503215 CLPTM1O96005 669 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 NAT2P11245 290 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 EVX1P49640 407 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 GALK2Q01415 458 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 FMODQ06828 376 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 MAPRE2Q15555 327 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 FAM120AOSQ5T036 256 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 SLC15A3Q8IY34 581 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 PCYOX1LQ8NBM8 494 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 LIPHQ8WWY8 451 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 SHARPINQ9H0F6 387 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 RNF121Q9H920 327 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 KCNS2Q9ULS6 477 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 MED31Q9Y3C7 131 aa13.95□□□□□ -0.18
SCLT1-204ENST00000503215 ELOVL7A1L3X0 281 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 MCIDASD6RGH6 385 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 FFAR1O14842 300 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 NCR1O76036 304 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 IFNA14P01570 189 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 ERCC1P07992 297 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-204ENST00000503215 MMP7P09237 267 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-204ENST00000503215 TACSTD2P09758 323 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 MAKP20794 623 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 ZNF133P52736 654 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-204ENST00000503215 SELENOWP63302 87 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 TOP3AQ13472 1001 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-204ENST00000503215 FHL1Q13642 323 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 SLC16A14Q7RTX9 510 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 IGFN1Q86VF2 1251 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 TREML1Q86YW5 311 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 ZNF540Q8NDQ6 660 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 CPEB3Q8NE35 698 aaKnown RBP13.94□□□□□ -0.18
SCLT1-204ENST00000503215 NSMAFQ92636 917 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 YIPF5Q969M3 257 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 MAN2C1Q9NTJ4 1040 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 SLC7A8Q9UHI5 535 aa13.94□□□□□ -0.18
SCLT1-204ENST00000503215 FBXO9Q9UK97 447 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-204ENST00000503215 HAX1O00165 279 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 WNT9BO14905 357 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 FARS2O95363 451 aaKnown RBP13.93□□□□□ -0.18
SCLT1-204ENST00000503215 IGF2P01344 180 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 IFI30P13284 250 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 APEX1P27695 318 aaKnown RBP13.93□□□□□ -0.18
SCLT1-204ENST00000503215 MNAT1P51948 309 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 LIPEQ05469 1076 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 CCNIQ14094 377 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 TMEM53Q6P2H8 277 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 LRRC75AQ8NAA5 344 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 GTF3AQ92664 365 aaKnown RBP13.93□□□□□ -0.18
SCLT1-204ENST00000503215 NABP1Q96AH0 204 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 POLR2J2Q9GZM3 115 aaKnown RBP13.93□□□□□ -0.18
SCLT1-204ENST00000503215 POLR2J3Q9H1A7 115 aaKnown RBP13.93□□□□□ -0.18
SCLT1-204ENST00000503215 CCDC134Q9H6E4 229 aa13.93□□□□□ -0.18
SCLT1-204ENST00000503215 NME4O00746 187 aa13.92□□□□□ -0.18
SCLT1-204ENST00000503215 THRBP10828 461 aa13.92□□□□□ -0.18
SCLT1-204ENST00000503215 COX4I1P13073 169 aa13.92□□□□□ -0.18
SCLT1-204ENST00000503215 MAGEB1P43366 347 aa13.92□□□□□ -0.18
SCLT1-204ENST00000503215 DAP3P51398 398 aaKnown RBP13.92□□□□□ -0.18
SCLT1-204ENST00000503215 ZNF84P51523 738 aa13.92□□□□□ -0.18
SCLT1-204ENST00000503215 GNGT1P63211 74 aa13.92□□□□□ -0.18
SCLT1-204ENST00000503215 ST3GAL3Q11203 375 aa13.92□□□□□ -0.18
SCLT1-204ENST00000503215 CR1LQ2VPA4 569 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms