RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ZNF503-AS2A6NEH8 195 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 DPRXA6NFQ7 191 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 H3BNX3 289 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 IDH3BO43837 385 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 ARHGDIAP52565 204 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 UBE2NP61088 152 aaKnown RBP21.93■■□□□ 1.1
LSM6-202ENST00000502781 KLHL17Q6TDP4 642 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 PTCHD4Q6ZW05 846 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 FAM169BQ8N8A8 192 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 IFT27Q9BW83 186 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 ESRP2Q9H6T0 727 aaKnown RBP21.93■■□□□ 1.1
LSM6-202ENST00000502781 B3GNT2Q9NY97 397 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 ZNF224Q9NZL3 707 aa21.93■■□□□ 1.1
LSM6-202ENST00000502781 VSX1Q9NZR4 365 aaPredicted RBP21.93■■□□□ 1.1
LSM6-202ENST00000502781 CRNNQ9UBG3 495 aaPredicted RBP21.93■■□□□ 1.1
LSM6-202ENST00000502781 H7C1C5 153 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 ZNF84P51523 738 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 LCN6P62502 163 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 ZFP1Q6P2D0 407 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 AMIGO2Q86SJ2 522 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 OR52L1Q8NGH7 329 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 SNX18Q96RF0 628 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 PLEKHF2Q9H8W4 249 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 AKAP6Q13023 2319 aa21.92■■□□□ 1.1
LSM6-202ENST00000502781 SOCS2O14508 198 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 IGFBP1P08833 259 aaPredicted RBP21.91■■□□□ 1.1
LSM6-202ENST00000502781 CDKN2AP42771 156 aaKnown RBP21.91■■□□□ 1.1
LSM6-202ENST00000502781 MRPS34P82930 218 aaKnown RBP21.91■■□□□ 1.1
LSM6-202ENST00000502781 BSPH1Q075Z2 132 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 CLEC12AQ5QGZ9 265 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 FAHD1Q6P587 224 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 FOXL2NBQ6ZUU3 175 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 C10orf67Q8IYJ2 551 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 LNX2Q8N448 690 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 SLC22A24Q8N4F4 322 aa21.91■■□□□ 1.1
LSM6-202ENST00000502781 CENPNQ96H22 339 aaPredicted RBP21.91■■□□□ 1.1
LSM6-202ENST00000502781 MOV10Q9HCE1 1003 aaKnown RBP21.91■■□□□ 1.1
LSM6-202ENST00000502781 MGRN1O60291 552 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 SOX14O95416 240 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 IGKV3-15P01624 115 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 OR8G3PP0DMU2 310 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 HIST1H1CP16403 213 aaKnown RBP21.9■■□□□ 1.1
LSM6-202ENST00000502781 ZNF83P51522 516 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 TUBA1BP68363 451 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 TUBA4AP68366 448 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 C3orf36Q3SXR2 165 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 FBXW10Q5XX13 1052 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 TMEM108Q6UXF1 575 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 TUBA1AQ71U36 451 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 HIPK1Q86Z02 1210 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 NABP1Q96AH0 204 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 LURAP1Q96LR2 239 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 TSSK6Q9BXA6 273 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 C1QTNF6Q9BXI9 259 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 POLQO75417 2590 aa21.9■■□□□ 1.1
LSM6-202ENST00000502781 HRNRQ86YZ3 2850 aaPredicted RBP21.89■■□□□ 1.1
LSM6-202ENST00000502781 ENTPD5O75356 428 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 IGLV1-44P01699 117 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 CBR1P16152 277 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 PTAFRP25105 342 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 CD40P25942 277 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 SLC36A3Q495N2 470 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 ZNF362Q5T0B9 420 aaPredicted RBP21.89■■□□□ 1.1
LSM6-202ENST00000502781 SKA3Q8IX90 412 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 DNAJC9Q8WXX5 260 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 NSMAFQ92636 917 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 ZNF75AQ96N20 296 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 SYT4Q9H2B2 425 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 ZNF556Q9HAH1 456 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 TBC1D23Q9NUY8 699 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 BAIAP2Q9UQB8 552 aa21.89■■□□□ 1.1
LSM6-202ENST00000502781 PLAUP00749 431 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 HLA-HP01893 362 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 CTLA4P16410 223 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 SVOPLQ8N434 492 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 ATG16L2Q8NAA4 619 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 OR4Q3Q8NH05 313 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 OR4K13Q8NH42 304 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 DDOQ99489 341 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 GABARAPL1Q9H0R8 117 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 SIAEQ9HAT2 523 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 NOX3Q9HBY0 568 aa21.88■■□□□ 1.09
LSM6-202ENST00000502781 G3V2T6 193 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 M0R1B8 84 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 FARS2O95363 451 aaKnown RBP21.87■■□□□ 1.09
LSM6-202ENST00000502781 CD3EP07766 207 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 OSMP13725 252 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 NPR2P20594 1047 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 NOS3P29474 1203 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 CDAP32320 146 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 DAPP51397 102 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 ADAM5Q6NVV9 412 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 ZNF704Q6ZNC4 412 aaPredicted RBP21.87■■□□□ 1.09
LSM6-202ENST00000502781 ZDHHC13Q8IUH4 622 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 NPEPL1Q8NDH3 523 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 OR2T33Q8NG76 320 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 FGFBP3Q8TAT2 258 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 NANOS1Q8WY41 292 aaKnown RBP21.87■■□□□ 1.09
LSM6-202ENST00000502781 HTRA1Q92743 480 aa21.87■■□□□ 1.09
LSM6-202ENST00000502781 NMNAT3Q96T66 252 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms