RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 TP53I3Q53FA7 332 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 NPSR1Q6W5P4 371 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF782Q6ZMW2 699 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-203ENST00000502773 TCTE3Q8IZS6 198 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 OR6V1Q8N148 313 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF433Q8N7K0 673 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ZFP41Q8N8Y5 198 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ZSCAN1Q8NBB4 408 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 NPEPL1Q8NDH3 523 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 AGBL5Q8NDL9 886 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 MARC2Q969Z3 335 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 SLC25A36Q96CQ1 311 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 NMNAT3Q96T66 252 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 TCEAL7Q9BRU2 100 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 WDR54Q9H977 334 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 BEX1Q9HBH7 125 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 TREM1Q9NP99 234 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 LANCL2Q9NS86 450 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 FOXJ3Q9UPW0 622 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 CPED1A4D0V7 1026 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 GABARAPH6UMI1 98 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 GPR171O14626 319 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 HSPA12AO43301 675 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 EIF1BO60739 113 aaKnown RBP6.73□□□□□ -1.33
PDGFC-203ENST00000502773 SLC22A5O76082 557 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ZIC2O95409 532 aaPredicted RBP6.73□□□□□ -1.33
PDGFC-203ENST00000502773 DNASE1P24855 282 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 TSPAN5P62079 268 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 BATFQ16520 125 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ELP2Q6IA86 826 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 UNQ9370/PRO34162Q6UXP9 181 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 WDR5BQ86VZ2 330 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 BBS1Q8NFJ9 593 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 OR4C3Q8NH37 302 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF721Q8TF20 911 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 INTS12Q96CB8 462 aaKnown RBP6.73□□□□□ -1.33
PDGFC-203ENST00000502773 NMNAT2Q9BZQ4 307 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 UNKLQ9H9P5 680 aaKnown RBP6.73□□□□□ -1.33
PDGFC-203ENST00000502773 GFOD1Q9NXC2 390 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ALKBH4Q9NXW9 302 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 IL20RAQ9UHF4 553 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 DOCK8Q8NF50 2099 aa6.73□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF780AO75290 641 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SCRG1O75711 98 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SLC2A10O95528 541 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 IGHMP01871 453 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 IGKV3-11P04433 115 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ASAH2BP0C7U1 165 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ANXA3P12429 323 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SHC1P29353 583 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 OR1D4P47884 311 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 CASP6P55212 293 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 DOC2BQ14184 412 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 CD276Q5ZPR3 534 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RTL6Q6ICC9 239 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 FDX2Q6P4F2 183 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RAB11FIP2Q7L804 512 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 LINGO2Q7L985 606 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF679Q8IYX0 411 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 MEIOBQ8N635 442 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 BOLLQ8N9W6 283 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 BARHL1Q9BZE3 327 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 PPP1R3EQ9H7J1 279 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SRA1Q9HD15 236 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 B3GAT2Q9NPZ5 323 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ACOXLQ9NUZ1 547 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF107Q9UII5 783 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 KCNE5Q9UJ90 142 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 HHLA2Q9UM44 414 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 TICRRQ7Z2Z1 1910 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ACOD1A6NK06 481 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SOX1O00570 391 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 TSPAN2O60636 221 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RFPL3O75679 317 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RLN2P04090 185 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 H2AFB2P0C5Z0 115 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 UBCP0CG48 685 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 EPXP11678 715 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 GFERP55789 205 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZNF85Q03923 595 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RPL18Q07020 188 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RAB11BQ15907 218 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 TMEM69Q5SWH9 247 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ZC3H14Q6PJT7 736 aaKnown RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 THSD4Q6ZMP0 1018 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 COMTD1Q86VU5 262 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 LURAP1LQ8IV03 231 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 ARHGEF39Q8N4T4 335 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 WFDC6Q9BQY6 131 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 MARVELD1Q9BSK0 173 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 CACNG6Q9BXT2 260 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 C11orf54Q9H0W9 315 aaPredicted RBP6.72□□□□□ -1.33
PDGFC-203ENST00000502773 RNF167Q9H6Y7 350 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 EMC7Q9NPA0 242 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 SLC22A11Q9NSA0 550 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 HDGFL3Q9Y3E1 203 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 A0A1W2PS29 197 aa6.72□□□□□ -1.33
PDGFC-203ENST00000502773 PRSS37A4D1T9 235 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms