RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	ZNF469	Q96JG9	3925 aa	Predicted RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	TRAV27	A0A087WT01	109 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658		B9A039	149 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658		H7C417	338 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	XKRY	O14609	159 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	NDUFB2	O95178	105 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	CD8A	P01732	235 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	SERPINA5	P05154	406 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	CD14	P08571	375 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	MSX2	P35548	267 aa	Predicted RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	ACVR1B	P36896	505 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	SERPINF1	P36955	418 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	CDKN1A	P38936	164 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	GPR4	P46093	362 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	PTDSS1	P48651	473 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	SNRPD2	P62316	118 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	MRPS34	P82930	218 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	GALK2	Q01415	458 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	SPIB	Q01892	262 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	PLP2	Q04941	152 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	PIGF	Q07326	219 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	TOP3A	Q13472	1001 aa	Predicted RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	TRIM25	Q14258	630 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	RAB35	Q15286	201 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	GPR139	Q6DWJ6	353 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	TBPL2	Q6SJ96	375 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	B3GLCT	Q6Y288	498 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	SLC16A14	Q7RTX9	510 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	TSEN54	Q7Z6J9	526 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	BIVM	Q86UB2	503 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	DHFR2	Q86XF0	187 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	ZDHHC21	Q8IVQ6	265 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	WDFY1	Q8IWB7	410 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	SKA3	Q8IX90	412 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	LINC00471	Q8N535	108 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	FAM86B1	Q8N7N1	296 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	ARIH2OS	Q8N7S6	290 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	LRRC75A	Q8NAA5	344 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	OR4K5	Q8NGD3	323 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	OR13C2	Q8NGS9	318 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	FAM46A	Q96IP4	442 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	LRGUK	Q96M69	825 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658		Q96MF0	132 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	WAC	Q9BTA9	647 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	TRIM15	Q9C019	465 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	LRMDA	Q9H2I8	198 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	MAGIX	Q9H6Y5	334 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	RNF121	Q9H920	327 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	SIAE	Q9HAT2	523 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	DLL4	Q9NR61	685 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	ZNF346	Q9UL40	294 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	USF3	Q68DE3	2245 aa		9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	TEP1	Q99973	2627 aa	Known RBP	9.13	□□□□□ -0.95
FXR1-222	ENST00000498658	FLNA	P21333	2647 aa	Known RBP	9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	IGHV2OR16-5	A0A0B4J2B6	119 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	TRBV4-1	A0A0J9YWV2	114 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	IQCM	A0A1B0GVH7	501 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	SLC22A23	A1A5C7	686 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	SH3PXD2B	A1X283	911 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	CDC42EP2	O14613	210 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	DIRAS1	O95057	198 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	ERCC1	P07992	297 aa	Predicted RBP	9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	OR4A8	P0C604	315 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	ZNF14	P17017	642 aa	Predicted RBP	9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	OMP	P47874	163 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	LIMS1	P48059	325 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	GIPR	P48546	466 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	DSCR9	P59020	149 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	RPS23	P62266	143 aa	Known RBP	9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	RUNX1T1	Q06455	604 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	DAG1	Q14118	895 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	EFNB3	Q15768	340 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	IQCC	Q4KMZ1	466 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	DNAL1	Q4LDG9	190 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	FAM98B	Q52LJ0	330 aa	Known RBP	9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	C11orf71	Q6IPW1	123 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	LCN8	Q6JVE9	175 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	RINL	Q6ZS11	566 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	OR1J2	Q8NGS2	313 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	OR52J3	Q8NH60	311 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	ZNF519	Q8TB69	540 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	HDAC2	Q92769	488 aa	Known RBP	9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	ASB9	Q96DX5	294 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	GPX7	Q96SL4	187 aa	Predicted RBP	9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	CACNG6	Q9BXT2	260 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	ZNF224	Q9NZL3	707 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	SIGLEC7	Q9Y286	467 aa		9.12	□□□□□ -0.95
FXR1-222	ENST00000498658	ZNF503-AS2	A6NEH8	195 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	UNC119B	A6NIH7	251 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	GYG2	O15488	501 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	OR10H3	O60404	316 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	PTP4A3	O75365	173 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	CELA3B	P08861	270 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	INHBB	P09529	407 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	T-ENOL	P0DO92	83 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	ZNF35	P13682	527 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	APEH	P13798	732 aa	Known RBP	9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	FUT4	P22083	530 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	NR4A1	P22736	598 aa		9.11	□□□□□ -0.95
FXR1-222	ENST00000498658	FPR3	P25089	353 aa		9.11	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms