RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 IGHV1-2P23083 117 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 MPGP29372 298 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 CRABP1P29762 137 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 PYCR1P32322 319 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 HSPA13P48723 471 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 FOXG1P55316 489 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-227ENST00000498056 RPS7P62081 194 aaKnown RBP11.95□□□□□ -0.5
CPNE1-227ENST00000498056 IL5RAQ01344 420 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 TSC22D1Q15714 1073 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 HIST3H3Q16695 136 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 KLHL12Q53G59 568 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 THEM4Q5T1C6 240 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 TTC23Q5W5X9 447 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF474Q6S9Z5 364 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-227ENST00000498056 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-227ENST00000498056 GABRG1Q8N1C3 465 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 DEPDC4Q8N2C3 294 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 NPEPL1Q8NDH3 523 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 BBS1Q8NFJ9 593 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 OR6K6Q8NGW6 343 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 OR2T4Q8NH00 348 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 TMEM163Q8TC26 289 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 HTRA1Q92743 480 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF837Q96EG3 531 aaPredicted RBP11.95□□□□□ -0.5
CPNE1-227ENST00000498056 LRRC46Q96FV0 321 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 HCAR1Q9BXC0 346 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 RASSF1Q9NS23 344 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 TAS2R16Q9NYV7 291 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 DNAJC27Q9NZQ0 273 aa11.95□□□□□ -0.5
CPNE1-227ENST00000498056 FAM171A2A8MVW0 826 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 H0YJX3 145 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 DCTN6O00399 190 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 SLC16A6O15403 523 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 TLX2O43763 284 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 AHCYL1O43865 530 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 CLDN14O95500 239 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 RNF224P0DH78 156 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 SPI1P17947 270 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 IL32P24001 234 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 HOXC12P31275 282 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 CCKARP32238 428 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 CDAP32320 146 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 CD79BP40259 229 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 SH3BGRP55822 239 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 ADARB1P78563 741 aaKnown RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 ETFDHQ16134 617 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 C10orf128Q5T292 105 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF691Q5VV52 312 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 XKRXQ6PP77 449 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 KLHL24Q6TFL4 600 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 CPOQ8IVL8 374 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 C8orf59Q8N0T1 100 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 SETD9Q8NE22 299 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 OR51L1Q8NGJ5 315 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 LILRB4Q8NHJ6 448 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 KISS1RQ969F8 398 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 NMD3Q96D46 503 aaKnown RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF184Q99676 751 aaPredicted RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 FOXB1Q99853 325 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 RACGAP1Q9H0H5 632 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 OR51V1Q9H2C8 321 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 SEC61A2Q9H9S3 476 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 SRA1Q9HD15 236 aaKnown RBP11.94□□□□□ -0.5
CPNE1-227ENST00000498056 KCNJ16Q9NPI9 418 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 JKAMPQ9P055 326 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 POLR1DQ9Y2S0 133 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 FKBP7Q9Y680 259 aa11.94□□□□□ -0.5
CPNE1-227ENST00000498056 IGLV1-36A0A0B4J1U3 117 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 A8MXE2 369 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF99A8MXY4 864 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-227ENST00000498056 E9PQ18 207 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 H0YAE9 185 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 KHDRBS3O75525 346 aaKnown RBP11.93□□□□□ -0.5
CPNE1-227ENST00000498056 GPANK1O95872 356 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 HLA-DQA2P01906 255 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 GNAO1P09471 354 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 AGAP20933 346 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 SLC25A1P53007 311 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 ARF1P84077 181 aaKnown RBP11.93□□□□□ -0.5
CPNE1-227ENST00000498056 STK11Q15831 433 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF362Q5T0B9 420 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-227ENST00000498056 LCN1P1Q5VSP4 162 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 LRFN4Q6PJG9 635 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 SLC25A47Q6Q0C1 308 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF813Q6ZN06 617 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 BHLHA15Q7RTS1 189 aaPredicted RBP11.93□□□□□ -0.5
CPNE1-227ENST00000498056 BCDIN3DQ7Z5W3 292 aaKnown RBP11.93□□□□□ -0.5
CPNE1-227ENST00000498056 ENTHD1Q8IYW4 607 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 OR6V1Q8N148 313 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 FAM26EQ8N5C1 309 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 OR8J1Q8NGP2 316 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 OR1K1Q8NGR3 316 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 SSC4DQ8WTU2 575 aa11.93□□□□□ -0.5
CPNE1-227ENST00000498056 A0A096LPE4 126 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 A0A1W2PPZ6 126 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 RPL36A-HNRNPH2H7BZ11 118 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 GRNP28799 593 aaKnown RBP11.92□□□□□ -0.5
CPNE1-227ENST00000498056 CAPZA2P47755 286 aa11.92□□□□□ -0.5
CPNE1-227ENST00000498056 ZNF133P52736 654 aaPredicted RBP11.92□□□□□ -0.5
CPNE1-227ENST00000498056 CDH11P55287 796 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms