RNA–Protein interactions for RNA: ENST00000498007.1

HLA-B-255, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,087 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-255ENST00000498007 THEM4Q5T1C6 240 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 ZNF627Q7L945 461 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
HLA-B-255ENST00000498007 SLC22A24Q8N4F4 322 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 KBTBD8Q8NFY9 601 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 OR8D4Q8NGM9 314 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 FNDC8Q8TC99 324 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 NANOS1Q8WY41 292 aaKnown RBP17.28■□□□□ 0.36
HLA-B-255ENST00000498007 DENND2DQ9H6A0 471 aaPredicted RBP17.28■□□□□ 0.36
HLA-B-255ENST00000498007 SMURF2Q9HAU4 748 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 NTN4Q9HB63 628 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 KIF17Q9P2E2 1029 aa17.28■□□□□ 0.36
HLA-B-255ENST00000498007 CSMD1Q96PZ7 3565 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 A0A1W2PPL8 197 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 SLC22A23A1A5C7 686 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 PRSS37A4D1T9 235 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 FARS2O95363 451 aaKnown RBP17.27■□□□□ 0.36
HLA-B-255ENST00000498007 FCGR1AP12314 374 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 APEHP13798 732 aaKnown RBP17.27■□□□□ 0.36
HLA-B-255ENST00000498007 HOXB1P14653 301 aaPredicted RBP17.27■□□□□ 0.36
HLA-B-255ENST00000498007 PRKACGP22612 351 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 CDAP32320 146 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 ZNF133P52736 654 aaPredicted RBP17.27■□□□□ 0.36
HLA-B-255ENST00000498007 NPRL3Q12980 569 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 C1QTNF12Q5T7M4 302 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 SHQ1Q6PI26 577 aaKnown RBP17.27■□□□□ 0.36
HLA-B-255ENST00000498007 SLC25A47Q6Q0C1 308 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 PTCHD4Q6ZW05 846 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 ADCK1Q86TW2 530 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 MDP1Q86V88 176 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 JAZF1Q86VZ6 243 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 ATG16L2Q8NAA4 619 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 LRTOMTQ8WZ04 291 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 SH3GL3Q99963 347 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 SYT4Q9H2B2 425 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 LIME1Q9H400 295 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 RERGLQ9H628 205 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 PLEKHF2Q9H8W4 249 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 ZNF556Q9HAH1 456 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 UGT2A1Q9Y4X1 527 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 LRBAP50851 2863 aa17.27■□□□□ 0.36
HLA-B-255ENST00000498007 IGHV1-18A0A0C4DH31 117 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 IMPA2O14732 288 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 TXNDC12O95881 172 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 OR8G3PP0DMU2 310 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 PTAFRP25105 342 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 CD40P25942 277 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 PIGFQ07326 219 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 SLC35F1Q5T1Q4 408 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 LEG1Q6P5S2 330 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 AMIGO2Q86SJ2 522 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 CDH24Q86UP0 819 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 SKA3Q8IX90 412 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 CCDC36Q8IYA8 594 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 OR4K13Q8NH42 304 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 SLC38A2Q96QD8 506 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 TMEM204Q9BSN7 226 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 BDH2Q9BUT1 245 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 TSSK6Q9BXA6 273 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 SEC61A2Q9H9S3 476 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 NOX3Q9HBY0 568 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 IL20Q9NYY1 176 aa17.26■□□□□ 0.35
HLA-B-255ENST00000498007 H3BN98 237 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 ARPC3O15145 178 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 ENTPD5O75356 428 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 UBL3O95164 117 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 CELA3BP08861 270 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 PATE4P0C8F1 98 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 HIST1H1CP16403 213 aaKnown RBP17.25■□□□□ 0.35
HLA-B-255ENST00000498007 CDKN2AP42771 156 aaKnown RBP17.25■□□□□ 0.35
HLA-B-255ENST00000498007 PTDSS1P48651 473 aaKnown RBP17.25■□□□□ 0.35
HLA-B-255ENST00000498007 IDH3GP51553 393 aaPredicted RBP17.25■□□□□ 0.35
HLA-B-255ENST00000498007 SGCAQ16586 387 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 ZSCAN26Q16670 478 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 GSG1Q2KHT4 349 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 SLC36A3Q495N2 470 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 SLC22A25Q6T423 547 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 SLC16A14Q7RTX9 510 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 LRRC18Q8N456 261 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 SDR9C7Q8NEX9 313 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 OR5K1Q8NHB7 308 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 TEX47Q8TBZ9 253 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 NEUROG1Q92886 237 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 FOXN4Q96NZ1 517 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 SEMA6AQ9H2E6 1030 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 ZNF224Q9NZL3 707 aa17.25■□□□□ 0.35
HLA-B-255ENST00000498007 VSX1Q9NZR4 365 aaPredicted RBP17.25■□□□□ 0.35
HLA-B-255ENST00000498007 BHLHE40O14503 412 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 AHCYL1O43865 530 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 SLC16A7O60669 478 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 RAB36O95755 333 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 RENP00797 406 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 TP53P04637 393 aaPredicted RBP17.24■□□□□ 0.35
HLA-B-255ENST00000498007 ANXA8P13928 327 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 CBR1P16152 277 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 CTLA4P16410 223 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 ZNF23P17027 643 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 CDH11P55287 796 aa17.24■□□□□ 0.35
HLA-B-255ENST00000498007 MRPS34P82930 218 aaKnown RBP17.24■□□□□ 0.35
HLA-B-255ENST00000498007 COX10Q12887 443 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms