RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 TNNT3P45378 269 aaPredicted RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 CCL11P51671 97 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 STC1P52823 247 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 UBE2IP63279 158 aaKnown RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 UBXN1Q04323 297 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 PDE7AQ13946 482 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 NADK2Q4G0N4 442 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 HENMT1Q5T8I9 393 aaKnown RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 LRRC66Q68CR7 880 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 SCYL2Q6P3W7 929 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 DCUN1D2Q6PH85 259 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 OOSP2Q86WS3 158 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 PHF13Q86YI8 300 aaPredicted RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 CENPSQ8N2Z9 138 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 BRSK1Q8TDC3 778 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 RNASE8Q8TDE3 154 aaKnown RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 ADAMTS16Q8TE57 1224 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 PATE1Q8WXA2 126 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 SRSF12Q8WXF0 261 aaKnown RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 TGM7Q96PF1 710 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 IL4I1Q96RQ9 567 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 LYSMD1Q96S90 227 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 C11orf70Q9BRQ4 267 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 SLC7A5P2Q9GIP4 190 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 POLR1EQ9GZS1 481 aaKnown RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 SLC5A7Q9GZV3 580 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 MMADHCQ9H3L0 296 aaPredicted RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 APMAPQ9HDC9 416 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 ACP6Q9NPH0 428 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 MEPEQ9NQ76 525 aaPredicted RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 ZNF331Q9NQX6 463 aaPredicted RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 FARSAQ9Y285 508 aaKnown RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 HEBP2Q9Y5Z4 205 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 MRPS18BQ9Y676 258 aaKnown RBP3.27□□□□□ -1.89
MDM2-220ENST00000496959 ITPR2Q14571 2701 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 ABCA2Q9BZC7 2435 aa3.27□□□□□ -1.89
MDM2-220ENST00000496959 BSNQ9UPA5 3926 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SPTBP11277 2137 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 NAV3Q8IVL0 2385 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 NACAE9PAV3 2078 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 CCDC88CQ9P219 2028 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 A0A0J9YYE9 177 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SLC9B1P1A6NJY1 282 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 DHRS7CA6NNS2 312 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 K7EM74 188 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 PES1O00541 588 aaKnown RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 PRPSAP2O60256 369 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 NME2P1O60361 137 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SLC25A14O95258 325 aaPredicted RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 SYNGR4O95473 234 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SOD1P00441 154 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 TRBC1P01850 177 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SEMG1P04279 462 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 STSP08842 583 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 F8A1P23610 371 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 RBMXP38159 391 aaKnown RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 SPINT3P49223 89 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 OC90Q02509 493 aaPredicted RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 AP1B1Q10567 949 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 NCF4Q15080 339 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 ZKSCAN8Q15776 578 aaPredicted RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 CYP51A1Q16850 503 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 KCTD16Q68DU8 428 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 ZNF57Q68EA5 555 aaPredicted RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 OR5M10Q6IEU7 315 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 XKRXQ6PP77 449 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SPNS3Q6ZMD2 512 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 HSD11B1LQ7Z5J1 315 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 BCORP1Q8N888 145 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 FDCSPQ8NFU4 85 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 N4BP2L2Q92802 583 aaPredicted RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 C5orf30Q96GV9 206 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 CELF6Q96J87 481 aaKnown RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 TTC25Q96NG3 672 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 MCEEQ96PE7 176 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 VPS35Q96QK1 796 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SMIM14Q96QK8 99 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 ANP32EQ9BTT0 268 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 TBC1D10AQ9BXI6 508 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 DHX35Q9H5Z1 703 aaKnown RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 VPS37BQ9H9H4 285 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 MRPL47Q9HD33 250 aaKnown RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 SLC40A1Q9NP59 571 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 DCAF13Q9NV06 445 aaKnown RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 PARVAQ9NVD7 372 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 SOHLH2Q9NX45 425 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 EHFQ9NZC4 300 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 MBD2Q9UBB5 411 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 LCMT1Q9UIC8 334 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 BTRCQ9Y297 605 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 FKBP7Q9Y680 259 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 AP1M2Q9Y6Q5 423 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 POLQO75417 2590 aa3.26□□□□□ -1.89
MDM2-220ENST00000496959 NCOA6Q14686 2063 aaPredicted RBP3.26□□□□□ -1.89
MDM2-220ENST00000496959 COL12A1Q99715 3063 aa3.25□□□□□ -1.89
MDM2-220ENST00000496959 CCDC168Q8NDH2 2452 aa3.25□□□□□ -1.89
MDM2-220ENST00000496959 CPAMD8Q8IZJ3 1885 aa3.25□□□□□ -1.89
MDM2-220ENST00000496959 C1orf232A0A0U1RR37 186 aa3.25□□□□□ -1.89
MDM2-220ENST00000496959 E7EQ34 232 aa3.25□□□□□ -1.89
MDM2-220ENST00000496959 ANP32DO95626 131 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms