RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 MAKP20794 623 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 MALP21145 153 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 CD80P33681 288 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 PDIA2Q13087 525 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 FASTKD3Q14CZ7 662 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 GSG1Q2KHT4 349 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 DCST2Q5T1A1 773 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 CASC10Q5T4H9 136 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 AP1ARQ63HQ0 302 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 FAM71E1Q6IPT2 247 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 CENPLQ8N0S6 344 aaPredicted RBP8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 CPEB3Q8NE35 698 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 PTP4A1Q93096 173 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 ACPTQ9BZG2 426 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 LINC00470Q9BZP3 86 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 TOR3AQ9H497 397 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 C16orf95Q9H693 158 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 DENND2DQ9H6A0 471 aaPredicted RBP8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 ACSS3Q9H6R3 686 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 LZTFL1Q9NQ48 299 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 TBC1D23Q9NUY8 699 aa8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 MRPL15Q9P015 296 aaKnown RBP8.05□□□□□ -1.12
SMARCAL1-213ENST00000496037 A0A0U1RQK1 487 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 ZNF320A2RRD8 509 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 FAM25EA8MYX2 175 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 STX16-NPEPL1H3BU86 382 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 STX16O14662 325 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 SBK2P0C263 348 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 SLC6A9P48067 706 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 SEC61A1P61619 476 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 HABP2Q14520 560 aaPredicted RBP8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 LASP1Q14847 261 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 MOGQ16653 247 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 TTMPQ5BVD1 217 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 DMRTC1Q5HYR2 192 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 PDZK1Q5T2W1 519 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 FAM69AQ5T7M9 428 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 GRTP1Q5TC63 336 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 PRAMEF8Q5VWM4 474 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 PRAMEF7Q5VXH5 474 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 TMEM225Q6GV28 225 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 WDR73Q6P4I2 378 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 EMBQ6PCB8 327 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 PIWIL3Q7Z3Z3 882 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 GLB1L2Q8IW92 636 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 CTAGE3PQ8IX95 158 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 SYNPRQ8TBG9 265 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 METTL6Q8TCB7 284 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 AENQ8WTP8 325 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 FUZQ9BT04 418 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 ACTRT3Q9BYD9 372 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 C1orf21Q9H246 121 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 CENPHQ9H3R5 247 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 PIGUQ9H490 435 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 PATZ1Q9HBE1 687 aaKnown RBP8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 HSF4Q9ULV5 492 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 TMCO1Q9UM00 188 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 NPTNQ9Y639 398 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 DNAH7Q8WXX0 4024 aa8.04□□□□□ -1.12
SMARCAL1-213ENST00000496037 ZNF816-ZNF321PA0A0X1KG74 233 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 AQP7P3A6NL99 342 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 E9PQ18 207 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 POC1B-GALNT4F8VUJ3 575 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 NPIPB9F8W1W9 429 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 TSPAN4O14817 238 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 NOL3O60936 208 aaKnown RBP8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 SMIM24O75264 130 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 OR4F21O95013 312 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 AKR7A3O95154 331 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 RAB36O95755 333 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 CLPTM1O96005 669 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 CSTAP01040 98 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 HLA-HP01893 362 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 GPIP06744 558 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 TSPAN8P19075 237 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 DRD4P21917 467 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 HMOX2P30519 316 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 PTDSS1P48651 473 aaKnown RBP8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 PPP5CP53041 499 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 CDK5R2Q13319 367 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 SPDYAQ5MJ70 313 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 FAM219BQ5XKK7 198 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 NOXRED1Q6NXP6 359 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 EIF3MQ7L2H7 374 aaKnown RBP8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 GPR137CQ8N3F9 429 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 GALNT4Q8N4A0 578 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 ARFGAP2Q8N6H7 521 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 TMEM99Q8N816 258 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 C11orf44Q8N8P7 122 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 HIPK4Q8NE63 616 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 DCAKDQ8WVC6 231 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 CIDECQ96AQ7 238 aaPredicted RBP8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 VPS33AQ96AX1 596 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 NEURL3Q96EH8 262 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 TSPAN32Q96QS1 320 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 FOXB1Q99853 325 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 EGLN1Q9GZT9 426 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 NANOGQ9H9S0 305 aa8.03□□□□□ -1.12
SMARCAL1-213ENST00000496037 SMURF2Q9HAU4 748 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms