RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 MKLN1Q9UL63 735 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 TLN2Q9Y4G6 2542 aa5.66□□□□□ -1.5
VIM-207ENST00000495528 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.5
VIM-207ENST00000495528 C17orf51A8MQB3 221 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 EVPLLA8MZ36 301 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 ANKRD65E5RJM6 399 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 H0YC42 278 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 C16orf97H3BN30 126 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 ATP1B1P05026 303 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 CRHP06850 196 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 ZCCHC18P0CG32 403 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 POU2F1P14859 743 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 DRD5P21918 477 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 SRD5A2P31213 254 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 UGT2B10P36537 528 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 CRATP43155 626 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 EMDP50402 254 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 TPD52P55327 224 aaPredicted RBP5.65□□□□□ -1.5
VIM-207ENST00000495528 CLDN15P56746 228 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 B3GALT5-AS1P59052 145 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 SIRPAP78324 504 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 PLCXD2Q0VAA5 305 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 TNK1Q13470 666 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 DCTN2Q13561 401 aaKnown RBP5.65□□□□□ -1.5
VIM-207ENST00000495528 SELPLGQ14242 412 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 TRMT5Q32P41 509 aaKnown RBP5.65□□□□□ -1.5
VIM-207ENST00000495528 ZNF628Q5EBL2 1059 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 COQ5Q5HYK3 327 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 LRIF1Q5T3J3 769 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 C6orf163Q5TEZ5 329 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 HIST2H2BDQ6DRA6 164 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 HACD2Q6Y1H2 254 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 PLEKHM3Q6ZWE6 761 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 DHDDSQ86SQ9 333 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 PLCZ1Q86YW0 608 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 MSRB3Q8IXL7 192 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 DEFB107AQ8IZN7 70 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 TRIML2Q8N7C3 387 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 RNF148Q8N7C7 305 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 MAPK1IP1LQ8NDC0 245 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 OR52R1Q8NGF1 315 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 ZFP90Q8TF47 636 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 SNAPC3Q92966 411 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 TMBIM1Q969X1 311 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 TMCO6Q96DC7 493 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 FAM120BQ96EK7 910 aaKnown RBP5.65□□□□□ -1.5
VIM-207ENST00000495528 MPP4Q96JB8 637 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 SFXN2Q96NB2 322 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 ANKRD27Q96NW4 1050 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 NR1H4Q96RI1 486 aaPredicted RBP5.65□□□□□ -1.5
VIM-207ENST00000495528 ECSITQ9BQ95 431 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 SLC35A5Q9BS91 424 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 SLC25A33Q9BSK2 321 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 THTPAQ9BU02 230 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 TPT1P8Q9HAU6 139 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 EQTNQ9NQ60 294 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 ADA2Q9NZK5 511 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 MAT2BQ9NZL9 334 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 CFL2Q9Y281 166 aa5.65□□□□□ -1.5
VIM-207ENST00000495528 MRPS18CQ9Y3D5 142 aaKnown RBP5.65□□□□□ -1.5
VIM-207ENST00000495528 COL6A5A8TX70 2615 aa5.65□□□□□ -1.51
VIM-207ENST00000495528 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 RNF103-CHMP3A0A140T963 221 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 FRG2CA6NGY1 282 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 OR6C70A6NIJ9 312 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 SLC22A20A6NK97 555 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 UPK1AO00322 258 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 TO15178 435 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 ACOX3O15254 700 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 SEC14L5O43304 696 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 PLOD3O60568 738 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 TSPAN2O60636 221 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 REM1O75628 298 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 KRT75O95678 551 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 CH25HO95992 272 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 HMGN2P05204 90 aaKnown RBP5.64□□□□□ -1.51
VIM-207ENST00000495528 PAX1P15863 534 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 DPP4P27487 766 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 PPICP45877 212 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 SUCLG1P53597 346 aaKnown RBP5.64□□□□□ -1.51
VIM-207ENST00000495528 GAS1P54826 345 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 MTPNP58546 118 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 NCALDP61601 193 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 RGNQ15493 299 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 BCL2A1Q16548 175 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.64□□□□□ -1.51
VIM-207ENST00000495528 OR2A2Q6IF42 318 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 CHMP1BQ7LBR1 199 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 RNF130Q86XS8 419 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 UBQLNLQ8IYU4 475 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 OR5M1Q8NGP8 315 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 OR10A6Q8NH74 314 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 PSMA8Q8TAA3 256 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 ZNF675Q8TD23 568 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 RNF138Q8WVD3 245 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 RAB8BQ92930 207 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 OTUB1Q96FW1 271 aaPredicted RBP5.64□□□□□ -1.51
VIM-207ENST00000495528 COL21A1Q96P44 957 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 SH3GL1Q99961 368 aa5.64□□□□□ -1.51
VIM-207ENST00000495528 KLHL4Q9C0H6 718 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms