RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MSTN	O14793	375 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	FARS2	O95363	451 aa	Known RBP	11.97	□□□□□ -0.49
APTX-231	ENST00000494973	HRG	P04196	525 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	CTLA4	P16410	223 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	SLC2A5	P22732	501 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	FMO3	P31513	532 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	LCN6	P62502	163 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	RUNX1T1	Q06455	604 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	GGTLC2	Q14390	218 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	P2RY6	Q15077	328 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	SLC25A35	Q3KQZ1	300 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	C4orf17	Q53FE4	359 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	KLHL22	Q53GT1	634 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	C6orf141	Q5SZD1	244 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	SLC25A47	Q6Q0C1	308 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	C3P1	Q6ZMU1	363 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973		Q6ZT83	130 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	NUFIP2	Q7Z417	695 aa	Known RBP	11.97	□□□□□ -0.49
APTX-231	ENST00000494973	DPPA2	Q7Z7J5	298 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	MRGPRG	Q86SM5	289 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	OR6V1	Q8N148	313 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	OR9Q1	Q8NGQ5	310 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	OR6K6	Q8NGW6	343 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	CNIH3	Q8TBE1	160 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	IPCEF1	Q8WWN9	437 aa	Predicted RBP	11.97	□□□□□ -0.49
APTX-231	ENST00000494973	PTP4A1	Q93096	173 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF775	Q96BV0	537 aa	Predicted RBP	11.97	□□□□□ -0.49
APTX-231	ENST00000494973	ALKBH3	Q96Q83	286 aa	Predicted RBP	11.97	□□□□□ -0.49
APTX-231	ENST00000494973	USB1	Q9BQ65	265 aa	Known RBP	11.97	□□□□□ -0.49
APTX-231	ENST00000494973	OR51V1	Q9H2C8	321 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	C12orf49	Q9H741	205 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	CNOT2	Q9NZN8	540 aa	Known RBP	11.97	□□□□□ -0.49
APTX-231	ENST00000494973	DNAJC27	Q9NZQ0	273 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	B9D1	Q9UPM9	204 aa		11.97	□□□□□ -0.49
APTX-231	ENST00000494973	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	IGLV1-36	A0A0B4J1U3	117 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973		M0R129	80 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	FAM20B	O75063	409 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	TMCC2	O75069	709 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	ENTPD6	O75354	484 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	WBP4	O75554	376 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	TOX	O94900	526 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	PIP	P12273	146 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	PAX7	P23759	505 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	LAP3	P28838	519 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	MPG	P29372	298 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	CHRNB4	P30926	498 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	ATP6V1E1	P36543	226 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	MTNR1A	P48039	350 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	ACTC1	P68032	377 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	ACTA1	P68133	377 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	MRPS34	P82930	218 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	ROR2	Q01974	943 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	RAB40B	Q12829	278 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	MRPL49	Q13405	166 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	APOF	Q13790	326 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	TSPO2	Q5TGU0	170 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	PLXDC2	Q6UX71	529 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	FOXL2NB	Q6ZUU3	175 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	SSX8	Q7RTT4	187 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	CCDC36	Q8IYA8	594 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	ZNF786	Q8N393	782 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	C1orf162	Q8NEQ5	155 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	OR10H5	Q8NGA6	315 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	APH1B	Q8WW43	257 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	MRPL48	Q96GC5	212 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	NR1H4	Q96RI1	486 aa	Predicted RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	CNN2	Q99439	309 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	RBM24	Q9BX46	236 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	NELFA	Q9H3P2	528 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	RERGL	Q9H628	205 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	CRLF2	Q9HC73	371 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	GPR35	Q9HC97	309 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	MOV10	Q9HCE1	1003 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	SRA1	Q9HD15	236 aa	Known RBP	11.96	□□□□□ -0.49
APTX-231	ENST00000494973	SLC7A10	Q9NS82	523 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	TAS2R16	Q9NYV7	291 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	TMEM14A	Q9Y6G1	99 aa		11.96	□□□□□ -0.49
APTX-231	ENST00000494973	ZFYVE26	Q68DK2	2539 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973		A0A0G2JNJ9	132 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973		A0A1W2PPL8	197 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF99	A8MXY4	864 aa	Predicted RBP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	SLC1A7	O00341	560 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	PHYH	O14832	338 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	MRPS14	O60783	128 aa	Known RBP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	UPK3A	O75631	287 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	TNFAIP8	O95379	198 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	FADS2	O95864	444 aa	Known RBP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	HLA-DQA2	P01906	255 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	DBT	P11182	482 aa	Known RBP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF823	P16415	610 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	MSR1	P21757	451 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	GSTT1	P30711	240 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	GABARAPL2	P60520	117 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	LSM6	P62312	80 aa	Known RBP	11.95	□□□□□ -0.5
APTX-231	ENST00000494973	HSF2	Q03933	536 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	ZNF91	Q05481	1191 aa		11.95	□□□□□ -0.5
APTX-231	ENST00000494973	FMOD	Q06828	376 aa		11.95	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms