RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 MAGEB1P43366 347 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 EVX1P49640 407 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 ZNF133P52736 654 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-208ENST00000494728 CHN2P52757 468 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 CDH15P55291 814 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 CLRN1P58418 232 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 TAS2R41P59536 307 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 GALK2Q01415 458 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 FHL1Q13642 323 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 CYLC2Q14093 348 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-208ENST00000494728 CYBRD1Q53TN4 286 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 COQ5Q5HYK3 327 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 GKAP1Q5VSY0 366 aaPredicted RBP9.97□□□□□ -0.81
VTI1A-208ENST00000494728 LRRC18Q8N456 261 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 POU5F2Q8N7G0 328 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 SLC30A7Q8NEW0 376 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 TMEM239Q8WW34 195 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 HDAC2Q92769 488 aaKnown RBP9.97□□□□□ -0.81
VTI1A-208ENST00000494728 SGTBQ96EQ0 304 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 C1orf159Q96HA4 380 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 ECSITQ9BQ95 431 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 MAN2C1Q9NTJ4 1040 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 SLC7A8Q9UHI5 535 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 A4GNTQ9UNA3 340 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 SNX13Q9Y5W8 968 aa9.97□□□□□ -0.81
VTI1A-208ENST00000494728 IGLV3-9A0A075B6K5 115 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 A0A1W2PPW3 197 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 FAM157AC9JC47 383 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 MCIDASD6RGH6 385 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 J3KTA2 159 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 MGRN1O60291 552 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 RP2O75695 350 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 ACADSP16219 412 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 MAKP20794 623 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 RBM34P42696 430 aaKnown RBP9.96□□□□□ -0.82
VTI1A-208ENST00000494728 ARFIP2P53365 341 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 GUCY1A3Q02108 690 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 TOP3AQ13472 1001 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-208ENST00000494728 LAPTM4AQ15012 233 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 C10orf128Q5T292 105 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 SLC16A14Q7RTX9 510 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 VTCN1Q7Z7D3 282 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 IGFN1Q86VF2 1251 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF101Q8IZC7 436 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF540Q8NDQ6 660 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 CPEB3Q8NE35 698 aaKnown RBP9.96□□□□□ -0.82
VTI1A-208ENST00000494728 CLDND2Q8NHS1 167 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 RASSF5Q8WWW0 418 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 LIPHQ8WWY8 451 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 TMEM158Q8WZ71 300 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 RCN3Q96D15 328 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 RACGAP1Q9H0H5 632 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 DENND2DQ9H6A0 471 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-208ENST00000494728 INIPQ9NRY2 104 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF275Q9NSD4 429 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-208ENST00000494728 CMTM6Q9NX76 183 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 DUSP13Q9UII6 198 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 FBXO9Q9UK97 447 aaPredicted RBP9.96□□□□□ -0.82
VTI1A-208ENST00000494728 BAG5Q9UL15 447 aa9.96□□□□□ -0.82
VTI1A-208ENST00000494728 A0A1W2PRG6 482 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 BBIP1A8MTZ0 92 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 FFAR1O14842 300 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 SNAP29O95721 258 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 IGF2P01344 180 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 HIST1H2ABP04908 130 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 ERCC1P07992 297 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 TROVE2P10155 538 aaKnown RBP eCLIP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 ZNF32P17041 273 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 RBMXP38159 391 aaKnown RBP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 WNT5AP41221 380 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 YAP1P46937 504 aaKnown RBP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 DAP3P51398 398 aaKnown RBP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 RPS23P62266 143 aaKnown RBP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 GLO1Q04760 184 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 MMEL1Q495T6 779 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 PABPC1L2AQ5JQF8 200 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 ERICH5Q6P6B1 374 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 RINLQ6ZS11 566 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 HIST3H2AQ7L7L0 130 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 MICU2Q8IYU8 434 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 LRRC75AQ8NAA5 344 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 RBM15BQ8NDT2 890 aaKnown RBP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 NSMAFQ92636 917 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 HPS1Q92902 700 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 HIST1H2ACQ93077 130 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 TPD52L3Q96J77 140 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 PRRC1Q96M27 445 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 C19orf24Q9BVV8 132 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 ARGLU1Q9NWB6 273 aaPredicted RBP9.95□□□□□ -0.82
VTI1A-208ENST00000494728 RHCGQ9UBD6 479 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 HIF3AQ9Y2N7 669 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 SPEF1Q9Y4P9 236 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 CACNG2Q9Y698 323 aa9.95□□□□□ -0.82
VTI1A-208ENST00000494728 DYSFO75923 2080 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 LOC100509620A0A075B734 347 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 TRAV27A0A087WT01 109 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 VSTM5A8MXK1 200 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 H7C1C5 153 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 NME4O00746 187 aa9.94□□□□□ -0.82
VTI1A-208ENST00000494728 PRSS23O95084 383 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms