RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 OR8G3PP0DMU2 310 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 T-ENOLP0DO92 83 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 CCL2P13500 99 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 PAX7P23759 505 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 SERPINF1P36955 418 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF84P51523 738 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 NUDT6P53370 316 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 RIPPLY3P57055 190 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 RPL27P61353 136 aaKnown RBP12.72□□□□□ -0.37
ATG4B-224ENST00000494132 RAB35Q15286 201 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 ADIPOQQ15848 244 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 SWI5Q1ZZU3 235 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 CLEC9AQ6UXN8 241 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 SLC16A14Q7RTX9 510 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 HDDC2Q7Z4H3 204 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 BIVMQ86UB2 503 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF584Q8IVC4 421 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 SEPHS2Q99611 448 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 ANKRD19PQ9H560 264 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 RNF121Q9H920 327 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 FAM53CQ9NYF3 392 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 ADAM21Q9UKJ8 722 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 SETD2Q9BYW2 2564 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-224ENST00000494132 A0A1W2PRQ8 180 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 SH3PXD2BA1X283 911 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 GPRIN2O60269 458 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 FARS2O95363 451 aaKnown RBP12.71□□□□□ -0.37
ATG4B-224ENST00000494132 IGHMP01871 453 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 FABP3P05413 133 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 OMPP47874 163 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 CHRNB3Q05901 458 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 DAG1Q14118 895 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 DGCR6Q14129 220 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 SGCAQ16586 387 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 MSMPQ1L6U9 139 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 ZBED5Q49AG3 693 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 C10orf128Q5T292 105 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 TMPRSS11FQ6ZWK6 438 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 SVOPLQ8N434 492 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF525Q8N782 197 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 OR4F15Q8NGB8 312 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF519Q8TB69 540 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 MCUR1Q96AQ8 359 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 NMD3Q96D46 503 aaKnown RBP12.71□□□□□ -0.37
ATG4B-224ENST00000494132 Q96M85 177 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 GPA33Q99795 319 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 VRK1Q99986 396 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-224ENST00000494132 OR51B6Q9H340 312 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 MOV10Q9HCE1 1003 aaKnown RBP12.71□□□□□ -0.37
ATG4B-224ENST00000494132 STX18Q9P2W9 335 aaKnown RBP12.71□□□□□ -0.37
ATG4B-224ENST00000494132 AURKCQ9UQB9 309 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 UGT2A1Q9Y4X1 527 aa12.71□□□□□ -0.37
ATG4B-224ENST00000494132 ZFHX3Q15911 3703 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 IGHV4-30-2A0A087WSY4 118 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 A0A1W2PPL8 197 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 HTR3EA5X5Y0 456 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 NPIPB13A6NJU9 1138 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 NPIPB4C9JG80 1138 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 H7C417 338 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 GADD45GO95257 159 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 ZNF35P13682 527 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 ITGA2P17301 1181 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 CALB2P22676 271 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 RRM2P31350 389 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 LIMS1P48059 325 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 MNAT1P51948 309 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 SNRPD2P62316 118 aaKnown RBP12.7□□□□□ -0.38
ATG4B-224ENST00000494132 MESTQ5EB52 335 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 OTPQ5XKR4 325 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 SLC25A47Q6Q0C1 308 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 THSD4Q6ZMP0 1018 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 ZCCHC24Q8N2G6 241 aaKnown RBP12.7□□□□□ -0.38
ATG4B-224ENST00000494132 PAQR4Q8N4S7 273 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-224ENST00000494132 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 NABP1Q96AH0 204 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 RASD2Q96D21 266 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 RSRC1Q96IZ7 334 aaKnown RBP12.7□□□□□ -0.38
ATG4B-224ENST00000494132 CLPTM1LQ96KA5 538 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 DHRS1Q96LJ7 313 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 FOXN4Q96NZ1 517 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 SORCS2Q96PQ0 1159 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 FUZQ9BT04 418 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 BARX1Q9HBU1 254 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-224ENST00000494132 FZR1Q9UM11 496 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 TMEM5Q9Y2B1 443 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 PMF1-BGLAPU3KQ54 211 aa12.7□□□□□ -0.38
ATG4B-224ENST00000494132 CENPBD1B2RD01 187 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 B9A039 149 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 IMPA2O14732 288 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 CD14P08571 375 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 FAM157BP0CG42 384 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ZNF32P17041 273 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 NPR2P20594 1047 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 NR4A1P22736 598 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ZNF133P52736 654 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-224ENST00000494132 FXYD6P3P58550 94 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 PPP1R8Q12972 351 aaKnown RBP12.69□□□□□ -0.38
ATG4B-224ENST00000494132 TAF11Q15544 211 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 ETFDHQ16134 617 aa12.69□□□□□ -0.38
ATG4B-224ENST00000494132 SLC36A2Q495M3 483 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms