RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 SH3GL3Q99963 347 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 EGLN3Q9H6Z9 239 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 NGBQ9NPG2 151 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 TMEM38BQ9NVV0 291 aa10.15□□□□□ -0.78
UBA3-211ENST00000493957 SAMHD1Q9Y3Z3 626 aaKnown RBP10.15□□□□□ -0.78
UBA3-211ENST00000493957 ITPR3Q14573 2671 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ATP6V1G2-DDX39BF2Z307 99 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 SOCS2O14508 198 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ARHGEF9O43307 516 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 FKBP6O75344 327 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 KRT36O76013 467 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CCNB2O95067 398 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 WNT11O96014 354 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CST1P01037 141 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 GASTP01350 101 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 RAF1P04049 648 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CECR9P0C854 216 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CD79AP11912 226 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CALCRP30988 508 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CAPZA2P47755 286 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 IDH3GP51553 393 aaPredicted RBP10.14□□□□□ -0.79
UBA3-211ENST00000493957 ZNF133P52736 654 aaPredicted RBP10.14□□□□□ -0.79
UBA3-211ENST00000493957 PIGFQ07326 219 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CCNIQ14094 377 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ETFDHQ16134 617 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ANKDD1AQ495B1 522 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ZNF672Q499Z4 452 aaPredicted RBP10.14□□□□□ -0.79
UBA3-211ENST00000493957 OTPQ5XKR4 325 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 SLC25A47Q6Q0C1 308 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ZNF620Q6ZNG0 422 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 PTCHD4Q6ZW05 846 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 SKA3Q8IX90 412 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 HS3ST5Q8IZT8 346 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ARIH2OSQ8N7S6 290 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 AQP11Q8NBQ7 271 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 OR8D4Q8NGM9 314 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 GNPDA2Q8TDQ7 276 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 GTPBP3Q969Y2 492 aaKnown RBP10.14□□□□□ -0.79
UBA3-211ENST00000493957 SAMD8Q96LT4 415 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ZNF75AQ96N20 296 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 ZNF570Q96NI8 536 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 FOXN4Q96NZ1 517 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 GPX7Q96SL4 187 aaPredicted RBP10.14□□□□□ -0.79
UBA3-211ENST00000493957 PLA2G12AQ9BZM1 189 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 OR52D1Q9H346 318 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 REEP1Q9H902 201 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 NRIP3Q9NQ35 241 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 B3GNT2Q9NY97 397 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 CRNNQ9UBG3 495 aaPredicted RBP10.14□□□□□ -0.79
UBA3-211ENST00000493957 MOKQ9UQ07 419 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 IER3IP1Q9Y5U9 82 aa10.14□□□□□ -0.79
UBA3-211ENST00000493957 F8P00451 2351 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 CENPBD1B2RD01 187 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 E7EQL1 145 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 TIPRLO75663 272 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 IGLV1-44P01699 117 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 SCG5P05408 212 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 PTAFRP25105 342 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 RASSF2P50749 326 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 CDH11P55287 796 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 NPRL3Q12980 569 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 TSPAN31Q12999 210 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 KRR1Q13601 381 aaKnown RBP10.13□□□□□ -0.79
UBA3-211ENST00000493957 KEAP1Q14145 624 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 TAF11Q15544 211 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 MICAQ29983 383 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 C10orf128Q5T292 105 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 SMARCD3Q6STE5 483 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 SLC22A25Q6T423 547 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 KLHL17Q6TDP4 642 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 TMEM108Q6UXF1 575 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 CCDC121Q6ZUS5 278 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 SLC22A24Q8N4F4 322 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 PAPD5Q8NDF8 572 aaKnown RBP10.13□□□□□ -0.79
UBA3-211ENST00000493957 OR10G2Q8NGC3 310 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 IGFBPL1Q8WX77 278 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 NABP1Q96AH0 204 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 SLC38A2Q96QD8 506 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 ALG12Q9BV10 488 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 OBP2BQ9NPH6 170 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 KRCC1Q9NPI7 259 aaPredicted RBP10.13□□□□□ -0.79
UBA3-211ENST00000493957 GRHPRQ9UBQ7 328 aa10.13□□□□□ -0.79
UBA3-211ENST00000493957 MAGED1Q9Y5V3 778 aaPredicted RBP10.13□□□□□ -0.79
UBA3-211ENST00000493957 SLC22A23A1A5C7 686 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 A6NIZ1 184 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 SOX14O95416 240 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 IGKV3-15P01624 115 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 TP53P04637 393 aaPredicted RBP10.12□□□□□ -0.79
UBA3-211ENST00000493957 SOD3P08294 240 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 CBR1P16152 277 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 DNASE1P24855 282 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 SDHAP31040 664 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 CDKN2AP42771 156 aaKnown RBP10.12□□□□□ -0.79
UBA3-211ENST00000493957 GIPRP48546 466 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 PTDSS1P48651 473 aaKnown RBP10.12□□□□□ -0.79
UBA3-211ENST00000493957 ZNF84P51523 738 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 ART1P52961 327 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 RAP1BP61224 184 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 RAP1AP62834 184 aa10.12□□□□□ -0.79
UBA3-211ENST00000493957 NAAAQ02083 359 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms