RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 OR7E24Q6IFN5 339 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 UQCC3Q6UW78 93 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 MSANTD1Q6ZTZ1 278 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 CHMP1BQ7LBR1 199 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 WDR53Q7Z5U6 358 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 ZER1Q7Z7L7 766 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 GALNT5Q7Z7M9 940 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 PDZD9Q8IXQ8 264 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 C12orf45Q8N5I9 185 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 WDSUB1Q8N9V3 476 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 OR52R1Q8NGF1 315 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 RNASE11Q8TAA1 199 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 SARAFQ96BY9 339 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 FAM120BQ96EK7 910 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 TRMT61AQ96FX7 289 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 WDYHV1Q96HA8 205 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 KCNJ15Q99712 375 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 SOSTQ9BQB4 213 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 YIPF4Q9BSR8 244 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 G6PC3Q9BUM1 346 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 PTDSS2Q9BVG9 487 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 EBPLQ9BY08 206 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 TMPRSS13Q9BYE2 586 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 QRSL1Q9H0R6 528 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 OR51J1Q9H342 316 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 ABCB9Q9NP78 766 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 ISYNA1Q9NPH2 558 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 BRD7Q9NPI1 651 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 SERHLQ9NQF3 203 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 CLN6Q9NWW5 311 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 NDUFB11Q9NX14 153 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 IMPAD1Q9NX62 359 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 CRIM1Q9NZV1 1036 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 PDP1Q9P0J1 537 aaPredicted RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 MYEF2Q9P2K5 600 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 NLKQ9UBE8 527 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 AASSQ9UDR5 926 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 MALT1Q9UDY8 824 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 TRPS1Q9UHF7 1281 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 EXO1Q9UQ84 846 aaKnown RBP7.35□□□□□ -1.23
HDAC6-234ENST00000493923 GSTK1Q9Y2Q3 226 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 NPTNQ9Y639 398 aa7.35□□□□□ -1.23
HDAC6-234ENST00000493923 A0A1W2PQL4 384 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 MCIDASD6RGH6 385 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 PHYHO14832 338 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ADAMDEC1O15204 470 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 SELENOFO60613 162 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 MITFO75030 526 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ICOSLGO75144 302 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 GPX5O75715 221 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 EPPINO95925 133 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 OTCP00480 354 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 PTHP01270 115 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ATP1B1P05026 303 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 FBP1P09467 338 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 HSMCR30P0CW71 290 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 SULT1A3P0DMM9 295 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 SULT1A4P0DMN0 295 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 CYP4B1P13584 511 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 MAPK3P27361 379 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 SLC6A1P30531 599 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 RPS19P39019 145 aaKnown RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 UFM1P61960 85 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 EEF1A1P68104 462 aaKnown RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ST3GAL4Q11206 333 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 FOXF2Q12947 444 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 MED22Q15528 200 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 SNAPC1Q16533 368 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 LGALSLQ3ZCW2 172 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 IQCCQ4KMZ1 466 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 FLYWCH1Q4VC44 716 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 EEF1A1P5Q5VTE0 462 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 HLA-DQA1Q5Y7H0 255 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 LIN54Q6MZP7 749 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ANGPTL8Q6UXH0 198 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 RNF165Q6ZSG1 346 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 TMEM179BQ7Z7N9 219 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 CALHM3Q86XJ0 350 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 CCDC116Q8IYX3 515 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 HS3ST5Q8IZT8 346 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 SPAG16Q8N0X2 631 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 C9orf106Q8NAJ2 232 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 OR4N2Q8NGD1 307 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 OR9A2Q8NGT5 310 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 C16orf78Q8WTQ4 265 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ASB13Q8WXK3 278 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 EXOSC8Q96B26 276 aaKnown RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 UPRTQ96BW1 309 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 TMEM41AQ96HV5 264 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 FCRL1Q96LA6 429 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 KCTD7Q96MP8 289 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 MOGAT1Q96PD6 335 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ZNF382Q96SR6 550 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 ZNF559Q9BR84 538 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 THUMPD3Q9BV44 507 aaKnown RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 RTN4RQ9BZR6 473 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 NKX6-2Q9C056 277 aaPredicted RBP7.34□□□□□ -1.23
HDAC6-234ENST00000493923 PRDM14Q9GZV8 571 aa7.34□□□□□ -1.23
HDAC6-234ENST00000493923 SNTG1Q9NSN8 517 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms