RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 RTN4RQ9BZR6 473 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 FOXQ1Q9C009 403 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 C20orf85Q9H1P6 137 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ANKRD10Q9NXR5 420 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SLCO1C1Q9NYB5 712 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SCP2D1Q9UJQ7 156 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 RCE1Q9Y256 329 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 BOLA1Q9Y3E2 137 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 HSPB11Q9Y547 144 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 GLSO94925 669 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ONECUT2O95948 504 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 SPARCP09486 303 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 CSF1P09603 554 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ZNF823P16415 610 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 CDK2P24941 298 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 CCR6P51684 374 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 TAS2R20P59543 309 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 GNG2P59768 71 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ADAM8P78325 824 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 PUDPQ08623 228 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ANKRD16Q6P6B7 361 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 ESPNLQ6ZVH7 1005 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 H1FNTQ75WM6 255 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 UTS2BQ765I0 119 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 BPHLQ86WA6 291 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 PRSS58Q8IYP2 241 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 UTP23Q9BRU9 249 aaKnown RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 TTYH1Q9H313 450 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 AUNIPQ9H7T9 357 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 C19orf25Q9UFG5 118 aaPredicted RBP8.7□□□□□ -1.02
NPHP3-209ENST00000493732 PISDQ9UG56 409 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 KCNG2Q9UJ96 466 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 DHDHQ9UQ10 334 aa8.7□□□□□ -1.02
NPHP3-209ENST00000493732 VSTM2BA6NLU5 285 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 C4orf47A7E2U8 309 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 SNRPGP15A8MWD9 76 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 FTCDNL1E5RQL4 147 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 NPIPA5E9PKD4 350 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 SOX1O00570 391 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 SLC17A2O00624 439 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 ALOX12BO75342 701 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 AQP8O94778 261 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 HRGP04196 525 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 MAS1P04201 325 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 IL5P05113 134 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 CPN1P15169 458 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 ADRA2CP18825 462 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 FSTP19883 344 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 FKBP2P26885 142 aaKnown RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 DCDP81605 110 aaKnown RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 INSM1Q01101 510 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 NR0B2Q15466 257 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 RAB11BQ15907 218 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 NKAIN1Q4KMZ8 207 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 WDR38Q5JTN6 314 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 PRAMEF17Q5VTA0 474 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 C1QL3Q5VWW1 255 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 CHRDL2Q6WN34 429 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 ZNF704Q6ZNC4 412 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 COX15Q7KZN9 410 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 HDDC2Q7Z4H3 204 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 ANKRD37Q7Z713 158 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 GLB1L2Q8IW92 636 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 IZUMO1Q8IYV9 350 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 PRSS35Q8N3Z0 413 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 OR11H7Q8NGC8 314 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 OR52N5Q8NH56 324 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 ZNF524Q96C55 264 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 FOXRED1Q96CU9 486 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 ZNF587Q96SQ5 575 aaPredicted RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 FANCFQ9NPI8 374 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 SERINC1Q9NRX5 453 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 CTSFQ9UBX1 484 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 RARRES3Q9UL19 164 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 NPIPA1Q9UND3 350 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 B3GALT5Q9Y2C3 310 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 NPTNQ9Y639 398 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 RANBP2P49792 3224 aaKnown RBP8.69□□□□□ -1.02
NPHP3-209ENST00000493732 REV3LO60673 3130 aa8.69□□□□□ -1.02
NPHP3-209ENST00000493732 A0A0A6YYH2 397 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 LOC100289279A0A1B0GTE1 492 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 A6NJ64 397 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 ETV2O00321 342 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-209ENST00000493732 SULT1C2O00338 296 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 GMFGO60234 142 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 PLGP00747 810 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-209ENST00000493732 ISG15P05161 165 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 GIMD1P0DJR0 217 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 CCKBRP32239 447 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 KIR3DL2P43630 455 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 MECP2P51608 486 aaKnown RBP8.68□□□□□ -1.02
NPHP3-209ENST00000493732 EFNA3P52797 238 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 GPR85P60893 370 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 EIF2B1Q14232 305 aaKnown RBP8.68□□□□□ -1.02
NPHP3-209ENST00000493732 CLPPQ16740 277 aaPredicted RBP8.68□□□□□ -1.02
NPHP3-209ENST00000493732 TMEM244Q5VVB8 128 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 LANCL3Q6ZV70 420 aa8.68□□□□□ -1.02
NPHP3-209ENST00000493732 LSRQ86X29 649 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms