RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CYTL1Q9NRR1 136 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SERTAD3Q9UJW9 196 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 VSIG4Q9Y279 399 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 KLHDC2Q9Y2U9 406 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 DMRT1Q9Y5R6 373 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 F8VVB4 439 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 F8VWA3 439 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CLEC3AO75596 197 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SNRNP70P08621 437 aaKnown RBP10.63□□□□□ -0.71
HDAC4-210ENST00000493582 VAMP1P23763 118 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 BCL6P41182 706 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CAV2P51636 162 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SKP1P63208 163 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 SKP2Q13309 424 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 EIPR1Q53HC9 387 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 FAM76BQ5HYJ3 339 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF425Q6IV72 752 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 LPCAT3Q6P1A2 487 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 ABHD17CQ6PCB6 329 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 DHRS11Q6UWP2 260 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 IL34Q6ZMJ4 242 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CXorf40AQ8TE69 158 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 IP6K3Q96PC2 410 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 C20orf24Q9BUV8 137 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 EDEM2Q9BV94 578 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 VN1R3Q9BXE9 311 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 CHRDQ9H2X0 955 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 LPAR3Q9UBY5 353 aa10.63□□□□□ -0.71
HDAC4-210ENST00000493582 A0A1W2PPH5 198 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 C5orf51A6NDU8 294 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 MT-ND4LP03901 98 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 CD14P08571 375 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 MELTFP08582 738 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 NME2P22392 152 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ACKR3P25106 362 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 RPS27P42677 84 aaKnown RBP10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ID4P47928 161 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 IL13RA1P78552 427 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 GGTLC2Q14390 218 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 DBX2Q6ZNG2 339 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 RASD2Q96D21 266 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 MSRAQ9UJ68 235 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 SLC27A6Q9Y2P4 619 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 TMED7Q9Y3B3 224 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 METTL21EPA6NDL7 271 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 OIP5O43482 229 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ABLIM3O94929 683 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF735P0CB33 412 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 PBX2P40425 430 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 VASPP50552 380 aaPredicted RBP10.62□□□□□ -0.71
HDAC4-210ENST00000493582 P2RY4P51582 365 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ACTBP60709 375 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ACTG1P63261 375 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ALKBH1Q13686 389 aaKnown RBP10.62□□□□□ -0.71
HDAC4-210ENST00000493582 ARHGAP11BQ3KRB8 267 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 KLHL26Q53HC5 615 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 NPEPL1Q8NDH3 523 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 RPS4Y2Q8TD47 263 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 FAM3DQ96BQ1 224 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 DTD2Q96FN9 168 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 SULT4A1Q9BR01 284 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 IL21Q9HBE4 155 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 CHMP1AQ9HD42 196 aaPredicted RBP10.62□□□□□ -0.71
HDAC4-210ENST00000493582 FLRT3Q9NZU0 649 aa10.62□□□□□ -0.71
HDAC4-210ENST00000493582 NUDT19A8MXV4 375 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 PPIHO43447 177 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 UPK3AO75631 287 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 SERPINA5P05154 406 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 RHOP08100 348 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 NME1P15531 152 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 PSMB6P28072 239 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 RBM34P42696 430 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 STARD6P59095 220 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 RAB2AP61019 212 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 CAP1Q01518 475 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 PLAURQ03405 335 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 GAS6Q14393 721 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TRMT12Q53H54 448 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TPGS2Q68CL5 300 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 SLC39A5Q6ZMH5 540 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF676Q8N7Q3 588 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 NLGN2Q8NFZ4 835 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 NUDCD2Q8WVJ2 157 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ROBO4Q8WZ75 1007 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 MENTQ9BUN1 341 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF350Q9GZX5 532 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ADAP2Q9NPF8 381 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ASH2LQ9UBL3 628 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 MRM2Q9UI43 246 aaKnown RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TBC1D3KA0A087X1G2 549 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TEX13DA0A0J9YY54 714 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TBC1D3BA6NDS4 549 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TBC1D3FA6NER0 549 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 MSGN1A6NI15 193 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 ZNF736B4DX44 427 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 SRPX2O60687 465 aaPredicted RBP10.61□□□□□ -0.71
HDAC4-210ENST00000493582 TMEM127O75204 238 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 YIF1AO95070 293 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 CD2P06729 351 aa10.61□□□□□ -0.71
HDAC4-210ENST00000493582 CD63P08962 238 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms