RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 ZNF69Q9UC07 566 aa14.97□□□□□ -0.01
NUP50-218ENST00000493456 LEF1Q9UJU2 399 aaPredicted RBP14.97□□□□□ -0.01
NUP50-218ENST00000493456 NOTCH1P46531 2555 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 PLSCR5A0PG75 271 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 LRRN3E7EW58 273 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 CLIC1O00299 241 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 ZNF500O60304 480 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 UBOX5O94941 541 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 IGHV1-46P01743 117 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 RGS8P57771 180 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 LRFN4Q6PJG9 635 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 ZNF771Q7L3S4 317 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 RBM15BQ8NDT2 890 aaKnown RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 BHLHE22Q8NFJ8 381 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 OR1J1Q8NGS3 322 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 TMEM109Q9BVC6 243 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 RSPO3Q9BXY4 272 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 WDR55Q9H6Y2 383 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 EVA1AQ9H8M9 152 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 CGGBP1Q9UFW8 167 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 POLR3KQ9Y2Y1 108 aaPredicted RBP14.96□□□□□ -0.01
NUP50-218ENST00000493456 AUP1Q9Y679 476 aa14.96□□□□□ -0.01
NUP50-218ENST00000493456 PRORSD1PA6NEY8 169 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 SPRY3O43610 288 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 MGRN1O60291 552 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 IGHMP01871 453 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 ADH4P08319 380 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 PGA4P0DJD7 388 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 PGA3P0DJD8 388 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 ZFP36P26651 326 aaKnown RBP14.95□□□□□ -0.02
NUP50-218ENST00000493456 GCH1P30793 250 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 APLNRP35414 380 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 LIPAP38571 399 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 MMP15P51511 669 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 BST1Q10588 318 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 ZNF154Q13106 437 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 ZNF718Q3SXZ3 478 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 UNQ6126/PRO20091Q6UXV3 157 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 RANBP3LQ86VV4 465 aaPredicted RBP14.95□□□□□ -0.02
NUP50-218ENST00000493456 MRI1Q9BV20 369 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 SDR39U1Q9NRG7 319 aaPredicted RBP14.95□□□□□ -0.02
NUP50-218ENST00000493456 CYSLTR2Q9NS75 346 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 SLC13A4Q9UKG4 626 aa14.95□□□□□ -0.02
NUP50-218ENST00000493456 TPST1O60507 370 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 QDPRP09417 244 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 POLR2JP52435 117 aaKnown RBP14.94□□□□□ -0.02
NUP50-218ENST00000493456 CDH12P55289 794 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 ZMAT1Q5H9K5 638 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 KLF17Q5JT82 389 aaPredicted RBP14.94□□□□□ -0.02
NUP50-218ENST00000493456 NXNQ6DKJ4 435 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 REEP3Q6NUK4 255 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 C1orf174Q8IYL3 243 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 SPICQ8N5J4 248 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 NFKBIDQ8NI38 313 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 IPCEF1Q8WWN9 437 aaPredicted RBP14.94□□□□□ -0.02
NUP50-218ENST00000493456 GTF2H4Q92759 462 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 ZNF48Q96MX3 618 aaPredicted RBP14.94□□□□□ -0.02
NUP50-218ENST00000493456 DIRC2Q96SL1 478 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 PAIP1Q9H074 479 aaKnown RBP14.94□□□□□ -0.02
NUP50-218ENST00000493456 MMP26Q9NRE1 261 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 ZDHHC8Q9ULC8 765 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 TRIM33Q9UPN9 1127 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 NPTNQ9Y639 398 aa14.94□□□□□ -0.02
NUP50-218ENST00000493456 TANC2Q9HCD6 1990 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 RNF13O43567 381 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 IGHV2-70P01814 119 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 IGHG1P01857 330 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 MMP7P09237 267 aaPredicted RBP14.93□□□□□ -0.02
NUP50-218ENST00000493456 ZNF12P17014 697 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 ZNF84P51523 738 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 HSF2Q03933 536 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 MELKQ14680 651 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 SLC9A3R2Q15599 337 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 CEP85LQ5SZL2 805 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 GCNT6Q5T4J0 391 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 MBNL2Q5VZF2 373 aaKnown RBP14.93□□□□□ -0.02
NUP50-218ENST00000493456 KLHL36Q8N4N3 616 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 GOLGA6L1Q8N7Z2 621 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 MAELQ96JY0 434 aaKnown RBP14.93□□□□□ -0.02
NUP50-218ENST00000493456 ZNF607Q96SK3 696 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 TAS2R5Q9NYW4 299 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 MMP24Q9Y5R2 645 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 INSIG2Q9Y5U4 225 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 ARHGAP32A7KAX9 2087 aa14.93□□□□□ -0.02
NUP50-218ENST00000493456 ZSCAN5BA6NJL1 495 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 A8MXK9 166 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 H3BSA7 217 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 RGS16O15492 202 aaPredicted RBP14.92□□□□□ -0.02
NUP50-218ENST00000493456 CHP2O43745 196 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 TPST2O60704 377 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 FMO6PO60774 539 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 CD55P08174 381 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 HOXB9P17482 250 aaPredicted RBP14.92□□□□□ -0.02
NUP50-218ENST00000493456 CCNOP22674 350 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 MTNR1AP48039 350 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 CLRN1P58418 232 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 CDK6Q00534 326 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 ZNF74Q16587 644 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 KRT71Q3SY84 523 aa14.92□□□□□ -0.02
NUP50-218ENST00000493456 HHATQ5VTY9 493 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms