RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 LINC00242Q5T6M2 205 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 C9orf135Q5VTT2 229 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 ACOT4Q8N9L9 421 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 DRAXINQ8NBI3 349 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 TNRC6AQ8NDV7 1962 aaKnown RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 ITLN2Q8WWU7 325 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 SYT11Q9BT88 431 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 SPATA2Q9UM82 520 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 STARD10Q9Y365 291 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 TCRBV9S1A1TA0A576 114 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 LRRIQ3A6PVS8 624 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 GPAA1O43292 621 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 CD5LO43866 347 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 SNAP91O60641 907 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 LALBAP00709 142 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 S100A9P06702 114 aaKnown RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 KLK3P07288 261 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 ABOP16442 354 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 CDH6P55285 790 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 ERVK11-1P61568 191 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 KCNJ2P63252 427 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 ARFRP1Q13795 201 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 ZNF658Q5TYW1 1059 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 Q6ZN92 141 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 C19orf35Q6ZS72 473 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 TRIM69Q86WT6 500 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 OR4Q3Q8NH05 313 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 C11orf45Q8TAV5 145 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 PRICKLE1Q96MT3 831 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 MCCC1Q96RQ3 725 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 RNF2Q99496 336 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 RHBGQ9H310 441 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 SCRT2Q9NQ03 307 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 C20orf96Q9NUD7 363 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 PAK1IP1Q9NWT1 392 aaPredicted RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 KCNIP1Q9NZI2 227 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 SLC7A8Q9UHI5 535 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 TRAF3IP3Q9Y228 551 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 TIMM22Q9Y584 194 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 RIF1Q5UIP0 2472 aaKnown RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 PTPN13Q12923 2485 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 PCM1Q15154 2024 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 USP27XA6NNY8 438 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 H6PDO95479 791 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 HPP00738 406 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 AMBPP02760 352 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 TPM3P06753 285 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 HTR1EP28566 365 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 GTF2E2P29084 291 aaKnown RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 SLC7A9P82251 487 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 ST3GAL3Q11203 375 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 UGT2A3Q6UWM9 527 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 PGAP1Q75T13 922 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 KRT222Q8N1A0 295 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 OR52K1Q8NGK4 314 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 ST8SIA1Q92185 356 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 TOMM40LQ969M1 308 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.45□□□□□ -2.02
SNX13-209ENST00000492626 HAVCR1Q96D42 359 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 PPP1R16AQ96I34 528 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 PLEKHA8Q96JA3 519 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 HSFY1Q96LI6 401 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 CCT8L2Q96SF2 557 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 BLZF1Q9H2G9 400 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 NXF3Q9H4D5 531 aaKnown RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 CRLF2Q9HC73 371 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 CCNB1IP1Q9NPC3 277 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 GLRX2Q9NS18 164 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 PLXNA2O75051 1894 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 DOCK9Q9BZ29 2069 aa2.45□□□□□ -2.02
SNX13-209ENST00000492626 BAZ2AQ9UIF9 1905 aaKnown RBP2.45□□□□□ -2.02
SNX13-209ENST00000492626 A0A1W2PQ67 120 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 H3BQF6 201 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 NBR2O15453 112 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 CCL16O15467 120 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 CXCL13O43927 109 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 CACNG3O60359 315 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 PIGRP01833 764 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 SP1P08047 785 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 KRT7P08729 469 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 ETS2P15036 469 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 CALCRP30988 508 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 DEFB113Q30KQ7 82 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 SLC22A6Q4U2R8 563 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 RFWD3Q6PCD5 774 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 ENPP6Q6UWR7 440 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 FTMTQ8N4E7 242 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 MAGEE2Q8TD90 523 aaPredicted RBP2.44□□□□□ -2.02
SNX13-209ENST00000492626 GTF3AQ92664 365 aaKnown RBP2.44□□□□□ -2.02
SNX13-209ENST00000492626 SGK3Q96BR1 496 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 CCDC126Q96EE4 140 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 LHX5Q9H2C1 402 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 AUNIPQ9H7T9 357 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 CAB39LQ9H9S4 337 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 NRBP2Q9NSY0 501 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 SCML2Q9UQR0 700 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 POLDIP2Q9Y2S7 368 aa2.44□□□□□ -2.02
SNX13-209ENST00000492626 NCOA6Q14686 2063 aaPredicted RBP2.44□□□□□ -2.02
SNX13-209ENST00000492626 IGKV6-21A0A0C4DH24 114 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms