RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 TMEM171Q8WVE6 324 aa13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 STMN2Q93045 179 aa13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 KISS1RQ969F8 398 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 GTPBP3Q969Y2 492 aaKnown RBP13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 KCNK17Q96T54 332 aa13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 NIPSNAP1Q9BPW8 284 aa13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 B3GAT2Q9NPZ5 323 aa13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 JMJD1CQ15652 2540 aa13.15□□□□□ -0.3
CDC42SE1-205ENST00000491825 G3V2T6 193 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 IMPA2O14732 288 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ARPC3O15145 178 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 AHCYL1O43865 530 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 KRT33AO76009 404 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ACADSP16219 412 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 RPS6KA3P51812 740 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF133P52736 654 aaPredicted RBP13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ROR2Q01974 943 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 TGFBR3Q03167 851 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 LGALS3BPQ08380 585 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 TOP3AQ13472 1001 aaPredicted RBP13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 CAMK2DQ13557 499 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 NCMAPQ5T1S8 102 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 LINGO2Q7L985 606 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 SSX8Q7RTT4 187 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 AMIGO2Q86SJ2 522 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ADCK1Q86TW2 530 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 PARP8Q8N3A8 854 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 GPR137CQ8N3F9 429 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 C17orf78Q8N4C9 275 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF433Q8N7K0 673 aaPredicted RBP13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 OR52L1Q8NGH7 329 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 OR6N1Q8NGY5 312 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 FNDC8Q8TC99 324 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 AKAP1Q92667 903 aaKnown RBP eCLIP13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 NMD3Q96D46 503 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF570Q96NI8 536 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 PKP2Q99959 881 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ALG12Q9BV10 488 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 OSBPL10Q9BXB5 764 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 CXorf56Q9H5V9 222 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 SMURF2Q9HAU4 748 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 GLTPQ9NZD2 209 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 GRHPRQ9UBQ7 328 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF346Q9UL40 294 aaKnown RBP13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ADAM18Q9Y3Q7 739 aa13.14□□□□□ -0.31
CDC42SE1-205ENST00000491825 ANKRD65E5RJM6 399 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 OVOL3O00110 214 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 IDH3BO43837 385 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 TRMUO75648 421 aaKnown RBP13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 LYZL6O75951 148 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 TP53P04637 393 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 DANCRP0C864 163 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF23P17027 643 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 IL32P24001 234 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 CLRN1P58418 232 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 ERVK-25P63136 954 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 RUNX1T1Q06455 604 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 KRTAP1-1Q07627 177 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 MESTQ5EB52 335 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 CARD17Q5XLA6 110 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 OR7E24Q6IFN5 339 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 KLHL17Q6TDP4 642 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF627Q7L945 461 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 BHLHA15Q7RTS1 189 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 P2RY8Q86VZ1 359 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 PQLC1Q8N2U9 271 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 MAGEE2Q8TD90 523 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 SAMD8Q96LT4 415 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 PLA2G12AQ9BZM1 189 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 ULBP2Q9BZM5 246 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 EGLN3Q9H6Z9 239 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 CRLF2Q9HC73 371 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 GPR35Q9HC97 309 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 KIF17Q9P2E2 1029 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 REV1Q9UBZ9 1251 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 IL20RAQ9UHF4 553 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 OAZ3Q9UMX2 235 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 RNF115Q9Y4L5 304 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 MAGED1Q9Y5V3 778 aaPredicted RBP13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 HIVEP2P31629 2446 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 USF3Q68DE3 2245 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 DSCAMO60469 2012 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 PRR14LQ5THK1 2151 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
CDC42SE1-205ENST00000491825 TEX13CA0A0J9YWL9 993 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 ZNF99A8MXY4 864 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 INAFM1C9JVW0 142 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 M0R3G1 203 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 BHLHE40O14503 412 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 PPP1R3DO95685 299 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 SOD3P08294 240 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 PRKACGP22612 351 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 PCSK6P29122 969 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 ACVR1BP36896 505 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 ATP5J2P56134 94 aa13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 KRR1Q13601 381 aaKnown RBP13.12□□□□□ -0.31
CDC42SE1-205ENST00000491825 GABRA6Q16445 453 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms