RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 C1orf52Q8N6N3 182 aaKnown RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 OR10Z1Q8NGY1 313 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 OR5K1Q8NHB7 308 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 MCFD2Q8NI22 146 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 NUBPLQ8TB37 319 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 BLOC1S5Q8TDH9 187 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 RNF133Q8WVZ7 376 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 FAM151AQ8WW52 585 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 RPL3LQ92901 407 aaKnown RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 NTAN1Q96AB6 310 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 DCPSQ96C86 337 aaKnown RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 BIRC7Q96CA5 298 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 C10orf35Q96D05 121 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 ZHX1-C8orf76Q96EF9 292 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 CPB2Q96IY4 423 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 CELF6Q96J87 481 aaKnown RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 HSFY1Q96LI6 401 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 ZNF582Q96NG8 517 aaPredicted RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 OPALINQ96PE5 141 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 ZNF300Q96RE9 604 aaPredicted RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 LGMNQ99538 433 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 APOL4Q9BPW4 351 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 DHRS9Q9BPW9 319 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 CCDC3Q9BQI4 270 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 NDUFAF3Q9BU61 184 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 CCDC32Q9BV29 185 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 ERVK-6Q9BXR3 956 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 PRRG4Q9BZD6 226 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 NXF2Q9GZY0 626 aaKnown RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 FAM49AQ9H0Q0 323 aaPredicted RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 DPAGT1Q9H3H5 408 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 DUSP21Q9H596 190 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 WDR54Q9H977 334 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 CAB39LQ9H9S4 337 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 KRCC1Q9NPI7 259 aaPredicted RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 POLE4Q9NR33 117 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 SDR39U1Q9NRG7 319 aaPredicted RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 C1RLQ9NZP8 487 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 CCDC59Q9P031 241 aaKnown RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 CLN8Q9UBY8 286 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 MRM2Q9UI43 246 aaKnown RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 FBXO5Q9UKT4 447 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 CLEC4EQ9ULY5 219 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 KLK4Q9Y5K2 254 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 PEX16Q9Y5Y5 336 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 COL16A1Q07092 1604 aaPredicted RBP4.23□□□□□ -1.73
RTN4-215ENST00000491592 CNTNAP1P78357 1384 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 LY75O60449 1722 aa4.23□□□□□ -1.73
RTN4-215ENST00000491592 ADAMTSL1Q8N6G6 1762 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 KCNE1BA0A087WTH5 132 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 LOC100130705A0A1B0GUX0 176 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 TMEM202A6NGA9 273 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 METTL15A6NJ78 407 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 A8MT66 165 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 EFCAB9A8MZ26 197 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 H3BN98 237 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 SMLR1H3BR10 107 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 M0QZ24 198 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 UPK1AO00322 258 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 HSPB6O14558 160 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 XRCC2O43543 280 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 LATO43561 262 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 MFSD11O43934 449 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 TPST1O60507 370 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 LDB3O75112 727 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 HSBP1O75506 76 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 UGT2B17O75795 530 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 ANXA9O76027 345 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 SCELO95171 688 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 CLDN9O95484 217 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 HTR1AP08908 422 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 PET100P0DJ07 73 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 ZNF7P17097 686 aaPredicted RBP4.22□□□□□ -1.73
RTN4-215ENST00000491592 DTYMKP23919 212 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 IFNA8P32881 189 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 KDELR2P33947 212 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 TNFSF9P41273 254 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 MATKP42679 507 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 RGS6P49758 472 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 UGT2B15P54855 530 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 C1QTNF8P60827 252 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 SPCS3P61009 180 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 ISL1P61371 349 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 LCN2P80188 198 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 EMX1Q04741 257 aaPredicted RBP4.22□□□□□ -1.73
RTN4-215ENST00000491592 CD47Q08722 323 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 IMPG1Q17R60 797 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 ZSWIM7Q19AV6 140 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 SLC25A52Q3SY17 297 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 ZFP69Q49AA0 526 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 VPS26BQ4G0F5 336 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 LINC01620Q4KN68 170 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 BRMS1LQ5PSV4 323 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 PRAMEF19Q5SWL8 479 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 OTUD3Q5T2D3 398 aaPredicted RBP4.22□□□□□ -1.73
RTN4-215ENST00000491592 GLYATQ6IB77 296 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 FAM109BQ6ICB4 259 aaPredicted RBP4.22□□□□□ -1.73
RTN4-215ENST00000491592 TBPL2Q6SJ96 375 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 PRSS57Q6UWY2 283 aa4.22□□□□□ -1.73
RTN4-215ENST00000491592 ZNF562Q6V9R5 426 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms