RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CMTM6Q9NX76 183 aa7.62□□□□□ -1.19
HDAC3-211ENST00000491581 TAAR3PQ9P1P4 343 aa7.62□□□□□ -1.19
HDAC3-211ENST00000491581 CORO2BQ9UQ03 480 aa7.62□□□□□ -1.19
HDAC3-211ENST00000491581 FBN3Q75N90 2809 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 MXRA5Q9NR99 2828 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 TANC2Q9HCD6 1990 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 LOC100509620A0A075B734 347 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 TRAV27A0A087WT01 109 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 A0A1W2PPW3 197 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 M0R233 179 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 NDUFS8O00217 210 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 FFAR1O14842 300 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 SYNGR3O43761 229 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 AKAP8O43823 692 aaKnown RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 FMO6PO60774 539 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 RP2O75695 350 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 GPANK1O95872 356 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 BCL10O95999 233 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 MT-ATP6P00846 226 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 IFNA2P01563 188 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 MT-ND1P03886 318 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 SERPINA5P05154 406 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 LCKP06239 509 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 C8BP07358 591 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 MMP7P09237 267 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 ACADSP16219 412 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 NCK1P16333 377 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF26P17031 533 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF32P17041 273 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 ITGA2P17301 1181 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 GLRXP35754 106 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 CDH15P55291 814 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 CLRN1P58418 232 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 MVKQ03426 396 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 FHL1Q13642 323 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 HIST3H3Q16695 136 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 TSTQ16762 297 aaKnown RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 CYBRD1Q53TN4 286 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 ARMC4Q5T2S8 1044 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 SWT1Q5T5J6 900 aaKnown RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 UGT2A3Q6UWM9 527 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 C1orf229Q6ZS94 237 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 CCDC80Q76M96 950 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 TSEN54Q7Z6J9 526 aaKnown RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 PATL1Q86TB9 770 aaKnown RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 OR13C2Q8NGS9 318 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 TMEM158Q8WZ71 300 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 NMD3Q96D46 503 aaKnown RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 SLC25A44Q96H78 314 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF317Q96PQ6 595 aaPredicted RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 MRPL13Q9BYD1 178 aaKnown RBP7.61□□□□□ -1.19
HDAC3-211ENST00000491581 PCDHAC1Q9H158 963 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 MAN2C1Q9NTJ4 1040 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF229Q9UJW7 825 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 A4GNTQ9UNA3 340 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 TRIM33Q9UPN9 1127 aa7.61□□□□□ -1.19
HDAC3-211ENST00000491581 LCE2BO14633 110 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 PPIHO43447 177 aaKnown RBP7.6□□□□□ -1.19
HDAC3-211ENST00000491581 UBL3O95164 117 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 VENTXO95231 258 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 NGFP01138 241 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 OR8G3PP0DMU2 310 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 IFI30P13284 250 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 ADRA2CP18825 462 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 GPR4P46093 362 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 ERFP50548 548 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 CHN2P52757 468 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 ARFIP2P53365 341 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 PRSS12P56730 875 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 GALK2Q01415 458 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 SGCAQ16586 387 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 MMEL1Q495T6 779 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 PABPC1L2AQ5JQF8 200 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 THEM4Q5T1C6 240 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 RFPL4BQ6ZWI9 263 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 SLC16A14Q7RTX9 510 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 PIWIL3Q7Z3Z3 882 aaKnown RBP7.6□□□□□ -1.19
HDAC3-211ENST00000491581 TREML1Q86YW5 311 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-211ENST00000491581 LRRC75AQ8NAA5 344 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 OR51A7Q8NH64 312 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 TMEM239Q8WW34 195 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 NEU4Q8WWR8 484 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-211ENST00000491581 SGTBQ96EQ0 304 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 ECSITQ9BQ95 431 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 RABEP2Q9H5N1 569 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 EMC7Q9NPA0 242 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 INIPQ9NRY2 104 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 TMEM160Q9NX00 188 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 IL20RAQ9UHF4 553 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 TMEFF2Q9UIK5 374 aaPredicted RBP7.6□□□□□ -1.19
HDAC3-211ENST00000491581 ZNF346Q9UL40 294 aaKnown RBP7.6□□□□□ -1.19
HDAC3-211ENST00000491581 ADAM18Q9Y3Q7 739 aa7.6□□□□□ -1.19
HDAC3-211ENST00000491581 COL6A5A8TX70 2615 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 ZSCAN5BA6NJL1 495 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 MCIDASD6RGH6 385 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 NME4O00746 187 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 CDC42EP2O14613 210 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 SPRY3O43610 288 aa7.59□□□□□ -1.19
HDAC3-211ENST00000491581 DIRAS1O95057 198 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms