RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 ALPLP05186 524 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 ANPEPP15144 967 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 HIST1H1CP16403 213 aaKnown RBP13.88□□□□□ -0.19
TRA2A-208ENST00000490942 CDH2P19022 906 aaPredicted RBP13.88□□□□□ -0.19
TRA2A-208ENST00000490942 CRYGSP22914 178 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 IGFBP5P24593 272 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 ALDH3A2P51648 485 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 CRISP1P54107 249 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 CDK5Q00535 292 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 MYBPC1Q00872 1141 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 DAG1Q14118 895 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 RCN1Q15293 331 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 TAB1Q15750 504 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 PGGHGQ32M88 737 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 C3orf36Q3SXR2 165 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 KLHL24Q6TFL4 600 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 OR4Q3Q8NH05 313 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 RASD2Q96D21 266 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 DDOQ99489 341 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 GABARAPL3Q9BY60 117 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 PRRG3Q9BZD7 231 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 NELFAQ9H3P2 528 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 CMC2Q9NRP2 79 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 TMEFF2Q9UIK5 374 aaPredicted RBP13.88□□□□□ -0.19
TRA2A-208ENST00000490942 SLC25A15Q9Y619 301 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 FKBP7Q9Y680 259 aa13.88□□□□□ -0.19
TRA2A-208ENST00000490942 BAG2O95816 211 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 THBDP07204 575 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 OR8G3PP0DMU2 310 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 CDKN2AP42771 156 aaKnown RBP13.87□□□□□ -0.19
TRA2A-208ENST00000490942 GUCA1AP43080 201 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-208ENST00000490942 CENPAP49450 140 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 RAD23AP54725 363 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 UBE2NP61088 152 aaKnown RBP13.87□□□□□ -0.19
TRA2A-208ENST00000490942 GINS1Q14691 196 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 PPA1Q15181 289 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 ZNF362Q5T0B9 420 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-208ENST00000490942 ZNF813Q6ZN06 617 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 PTCHD4Q6ZW05 846 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 ZNF771Q7L3S4 317 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-208ENST00000490942 NPEPL1Q8NDH3 523 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 LINC01560Q8TB33 94 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 NANOS1Q8WY41 292 aaKnown RBP13.87□□□□□ -0.19
TRA2A-208ENST00000490942 EME1Q96AY2 570 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 ZNF837Q96EG3 531 aaPredicted RBP13.87□□□□□ -0.19
TRA2A-208ENST00000490942 RDH12Q96NR8 316 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 CIB1Q99828 191 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 RACGAP1Q9H0H5 632 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 SYT4Q9H2B2 425 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 SIAEQ9HAT2 523 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 FBXL3Q9UKT7 428 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 UGT2A1Q9Y4X1 527 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 ORC6Q9Y5N6 252 aa13.87□□□□□ -0.19
TRA2A-208ENST00000490942 FAM221AA4D161 298 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 RIIAD1A6NNX1 92 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 KHDRBS3O75525 346 aaKnown RBP13.86□□□□□ -0.19
TRA2A-208ENST00000490942 IGFBP1P08833 259 aaPredicted RBP13.86□□□□□ -0.19
TRA2A-208ENST00000490942 ZNF3P17036 446 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 PTDSS1P48651 473 aaKnown RBP13.86□□□□□ -0.19
TRA2A-208ENST00000490942 SLC25A1P53007 311 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 NR1H2P55055 460 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.86□□□□□ -0.197e-9■□□□□ 11
TRA2A-208ENST00000490942 TSC22D1Q15714 1073 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 BEX5Q5H9J7 111 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 FAM27BQ5VT28 67 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 C9orf135Q5VTT2 229 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 ANKRD34AQ69YU3 496 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 LEG1Q6P5S2 330 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 ZBTB49Q6ZSB9 765 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 ZBTB46Q86UZ6 589 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 SLC22A24Q8N4F4 322 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 CBR4Q8N4T8 237 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 PACRGLQ8N7B6 248 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 WDR31Q8NA23 367 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 OR52E2Q8NGJ4 325 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 OR4K13Q8NH42 304 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 NMNAT3Q96T66 252 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 CRNNQ9UBG3 495 aaPredicted RBP13.86□□□□□ -0.19
TRA2A-208ENST00000490942 PKDREJQ9NTG1 2253 aa13.86□□□□□ -0.19
TRA2A-208ENST00000490942 H0YHG0 523 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 EI24O14681 340 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 CASQ2O14958 399 aaPredicted RBP13.85□□□□□ -0.19
TRA2A-208ENST00000490942 UBL3O95164 117 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 SLC2A10O95528 541 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 CTLA4P16410 223 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 POU1F1P28069 291 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 BLVRAP53004 296 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 GLO1Q04760 184 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 FMODQ06828 376 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 NPRL3Q12980 569 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 RIPK1Q13546 671 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 PTGES3Q15185 160 aaKnown RBP13.85□□□□□ -0.19
TRA2A-208ENST00000490942 HIKESHIQ53FT3 197 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 SLX4IPQ5VYV7 408 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 SEZ6L2Q6UXD5 910 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 C22orf34Q6ZV56 151 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 SYT9Q86SS6 491 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 GLB1L2Q8IW92 636 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 OR2T4Q8NH00 348 aa13.85□□□□□ -0.19
TRA2A-208ENST00000490942 SLC38A2Q96QD8 506 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms