RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 MBD3L2Q8NHZ7 208 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 TMEM163Q8TC26 289 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ZPLD1Q8TCW7 415 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SLC25A36Q96CQ1 311 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 DDIT4LQ96D03 193 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 LRRC46Q96FV0 321 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ARL5BQ96KC2 179 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 ZNF582Q96NG8 517 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 GPX7Q96SL4 187 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 RHNO1Q9BSD3 238 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 TEX12Q9BXU0 123 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 PRRG3Q9BZD7 231 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 OR2B2Q9GZK3 357 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 DUSP21Q9H596 190 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 TMEM185BQ9H7F4 350 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SERINC1Q9NRX5 453 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 FKBP14Q9NWM8 211 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 CLN6Q9NWW5 311 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 MRPL39Q9NYK5 338 aaKnown RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 DNAJC27Q9NZQ0 273 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SEC14L4Q9UDX3 406 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 BLOC1S6Q9UL45 172 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 BAIAP2Q9UQB8 552 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 GPR52Q9Y2T5 361 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 TPRKBQ9Y3C4 175 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SPIN1Q9Y657 262 aaPredicted RBP6.72□□□□□ -1.33
CLDN1-202ENST00000490800 SPG11Q96JI7 2443 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 F8P00451 2351 aa6.72□□□□□ -1.33
CLDN1-202ENST00000490800 OR2M5A3KFT3 312 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TUBAL3A6NHL2 446 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 A6NNC1 897 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 PTGES3LE9PB15 166 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 H3BML4 177 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 BLOC1S5-TXNDC5H3BN57 136 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 PLPP3O14495 311 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ARPC3O15145 178 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 OPN1LWP04000 364 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 HIST1H2ABP04908 130 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 CD14P08571 375 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TFPIP10646 304 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ATP6V1B1P15313 513 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 EEF1B2P24534 225 aaKnown RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 OPRM1P35372 400 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 IDUAP35475 653 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 RPL4P36578 427 aaKnown RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 PEX19P40855 299 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 SLC15A1P46059 708 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 CLK1P49759 484 aaKnown RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 GFRA1P56159 465 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 CTXN1P60606 82 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ERVK-25P63136 954 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TUBA4AP68366 448 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 SLC35A2P78381 396 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 OR7A5Q15622 319 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 SGCBQ16585 318 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TMEM176BQ3YBM2 270 aaPredicted RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 FBXL19-AS1Q494R0 122 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ALG10Q5BKT4 473 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 FAM209AQ5JX71 171 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ZNF362Q5T0B9 420 aaPredicted RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 SLC35F1Q5T1Q4 408 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 AADACL4Q5VUY2 407 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 RAET1LQ5VY80 246 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 MEDAGQ5VYS4 303 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 C3orf33Q6P1S2 294 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 HIST3H2AQ7L7L0 130 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 CDC20BQ86Y33 519 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 OR5J2Q8NH18 312 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 LINC01560Q8TB33 94 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 FAM222BQ8WU58 562 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 SLC25A43Q8WUT9 341 aaPredicted RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 IPCEF1Q8WWN9 437 aaPredicted RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 GGHQ92820 318 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 HIST1H2ACQ93077 130 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 INTS12Q96CB8 462 aaKnown RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 LRR1Q96L50 414 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 Q96MT0 163 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ERMAPQ96PL5 475 aaPredicted RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 SIGLEC11Q96RL6 698 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TUBA1CQ9BQE3 449 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 PIGQQ9BRB3 760 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TAPBPLQ9BX59 468 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 AMBNQ9NP70 447 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 NRIP3Q9NQ35 241 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 HINT3Q9NQE9 182 aaKnown RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 CMC2Q9NRP2 79 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 SCN3BQ9NY72 215 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TAS2R5Q9NYW4 299 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 JKAMPQ9P055 326 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ERVK-18Q9QC07 812 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 PSORS1C1Q9UIG5 152 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 DUSP13Q9UII6 198 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ST6GALNAC2Q9UJ37 374 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 MRPS18CQ9Y3D5 142 aaKnown RBP6.71□□□□□ -1.34
CLDN1-202ENST00000490800 ADAM18Q9Y3Q7 739 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 IER3IP1Q9Y5U9 82 aa6.71□□□□□ -1.34
CLDN1-202ENST00000490800 TRBV23-1A0A0A0MS06 115 aa6.7□□□□□ -1.34
CLDN1-202ENST00000490800 EFCAB10A6NFE3 127 aa6.7□□□□□ -1.34
CLDN1-202ENST00000490800 RIIAD1A6NNX1 92 aa6.7□□□□□ -1.34
CLDN1-202ENST00000490800 CLCA1A8K7I4 914 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms