RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 PRDM7Q9NQW5 492 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 LRIT1Q9P2V4 623 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 PRODH2Q9UF12 536 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 INSL6Q9Y581 213 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 HCFC2Q9Y5Z7 792 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 CENPVL1A0A0U1RR11 272 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 SLC22A23A1A5C7 686 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 H3BML4 177 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 CSF2RBP32927 897 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF674Q2M3X9 581 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 SLC36A2Q495M3 483 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 PAPD4Q6PIY7 484 aaKnown RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 KIRREL2Q6UWL6 708 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 P4HA3Q7Z4N8 544 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 DND1Q8IYX4 353 aaKnown RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 STPG2Q8N412 459 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 DEFB119Q8N690 84 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 GIMAP5Q96F15 307 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 KCNJ15Q99712 375 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 MCOLN1Q9GZU1 580 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 VSX1Q9NZR4 365 aaPredicted RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 CYB5R1Q9UHQ9 305 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 DAPP1Q9UN19 280 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 FOXJ3Q9UPW0 622 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 FAM96BQ9Y3D0 163 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 TUBAL3A6NHL2 446 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF850A8MQ14 1090 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 H7C417 338 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 GPANK1O95872 356 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 F12P00748 615 aaPredicted RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 EMDP50402 254 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 GPR85P60893 370 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 KLF9Q13886 244 aaPredicted RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 MRM1Q6IN84 353 aaKnown RBP11.73□□□□□ -0.53
SHOX2-205ENST00000490689 SLC16A13Q7RTY0 426 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 OR4K15Q8NH41 348 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 PHYHIPQ92561 330 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 CPNE7Q9UBL6 633 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 OPN4Q9UHM6 478 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 PPIL1Q9Y3C6 166 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 PCDHGA5Q9Y5G8 931 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 MGAMO43451 1857 aa11.73□□□□□ -0.53
SHOX2-205ENST00000490689 TMEM229AB2RXF0 380 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 CST5P28325 142 aaPredicted RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 CTGFP29279 349 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 TACR3P29371 465 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 NR0B1P51843 470 aaKnown RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 PLCXD2Q0VAA5 305 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 EXOSC6Q5RKV6 272 aaKnown RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF626Q68DY1 528 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 DMKNQ6E0U4 476 aaPredicted RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF765Q7L2R6 523 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 GLRX5Q86SX6 157 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 FAM219AQ8IW50 185 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 ARIH2OSQ8N7S6 290 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 OR11G2Q8NGC1 345 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 JSRP1Q96MG2 331 aaPredicted RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 URM1Q9BTM9 101 aaKnown RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 WDR76Q9H967 626 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 RGPD3A6NKT7 1758 aaPredicted RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 RGPD4Q7Z3J3 1758 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF98A6NK75 572 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 ZNF726A6NNF4 738 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 P2RY10O00398 339 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 GLO1Q04760 184 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 SGCAQ16586 387 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 FAM181AQ8N9Y4 354 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 NPAS1Q99742 590 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 CHST6Q9GZX3 395 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 SCPEP1Q9HB40 452 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 TAS2R4Q9NYW5 299 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 KCNIP3Q9Y2W7 256 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 SERPINF1P36955 418 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 SNRPEP62304 92 aaKnown RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 SLC25A30Q5SVS4 291 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 UBE3DQ7Z6J8 389 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 OR51Q1Q8NH59 317 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 C19orf43Q9BQ61 176 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 VN1R3Q9BXE9 311 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 SLC22A11Q9NSA0 550 aa11.72□□□□□ -0.53
SHOX2-205ENST00000490689 C19orf53Q9UNZ5 99 aaPredicted RBP11.72□□□□□ -0.53
SHOX2-205ENST00000490689 OR6C68A6NDL8 312 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 TMEM200CA6NKL6 621 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 C17orf105B2RV13 164 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 KCNAB3O43448 404 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 ADH1BP00325 375 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 THBS1P07996 1170 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 PNMTP11086 282 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 CAV2P51636 162 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 RUNX2Q13950 521 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 ETFDHQ16134 617 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 CD200R1LQ6Q8B3 271 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 C12orf40Q86WS4 652 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 WDSUB1Q8N9V3 476 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 OR1M1Q8NGA1 313 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 PATE1Q8WXA2 126 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 HGDQ93099 445 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 NRSN2Q9GZP1 204 aa11.71□□□□□ -0.53
SHOX2-205ENST00000490689 CHRDQ9H2X0 955 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms