RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 DIRAS1O95057 198 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 HOXD4P09016 255 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TRAPPC2P0DI81 140 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TRAPPC2BP0DI82 140 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ADORA3P0DMS8 318 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 DBTP11182 482 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 PIPP12273 146 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SPNP16150 400 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ITGA2P17301 1181 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 GNLYP22749 145 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 FPR3P25089 353 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 GDF1P27539 372 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ABCD3P28288 659 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 RRM2P31350 389 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SOAT1P35610 550 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SOX6P35712 828 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 RFX3P48380 749 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CCT3P49368 545 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 RGS6P49758 472 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SMSP52788 366 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 EFNA3P52797 238 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 PNLIPRP2P54317 469 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SELENOWP63302 87 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 RBBP4Q09028 425 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 EXOSC7Q15024 291 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 RGNQ15493 299 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 LTB4RQ15722 352 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CEBPEQ15744 281 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 NTRK2Q16620 822 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 MICAQ29983 383 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 IFI44LQ53G44 452 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TRMT12Q53H54 448 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF628Q5EBL2 1059 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 RNASE12Q5GAN4 147 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ARMCX4Q5H9R4 360 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SPANXN2Q5MJ10 180 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 AGAP6Q5VW22 663 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TMEM211Q6ICI0 200 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF544Q6NX49 715 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 SLC30A6Q6NXT4 461 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TMEM107Q6UX40 140 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ANGPTL8Q6UXH0 198 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CCBE1Q6UXH8 406 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF621Q6ZSS3 439 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CHMP1BQ7LBR1 199 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 BCDIN3DQ7Z5W3 292 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TSEN54Q7Z6J9 526 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CCDC190Q86UF4 302 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 RNF130Q86XS8 419 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OR2L13Q8N349 312 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 STX19Q8N4C7 294 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF615Q8N8J6 731 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 COX18Q8N8Q8 333 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CDRT4Q8N9R6 151 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZFP62Q8NB50 900 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 C11orf65Q8NCR3 313 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 FAM83FQ8NEG4 500 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OR10G2Q8NGC3 310 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OR4C15Q8NGM1 316 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OR1J4Q8NGS1 313 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 GOT1L1Q8NHS2 421 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 GPR151Q8TDV0 419 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ADAMTS15Q8TE58 950 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 PAQR8Q8TEZ7 354 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OR5P2Q8WZ92 322 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CTHRC1Q96CG8 243 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OMA1Q96E52 524 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ELP4Q96EB1 424 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 C11orf24Q96F05 449 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 LRRC46Q96FV0 321 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 EGLN2Q96KS0 407 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 GPR137Q96N19 417 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF681Q96N22 645 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 FEVQ99581 238 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CDCA4Q9BXL8 241 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TBL1XR1Q9BZK7 514 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 NUAK2Q9H093 628 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 TPT1P8Q9HAU6 139 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 FOLH1BQ9HBA9 442 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 NEK6Q9HC98 313 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 EQTNQ9NQ60 294 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZCCHC3Q9NUD5 404 aaKnown RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 QPCTLQ9NXS2 382 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ZNF226Q9NYT6 803 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 COQ3Q9NZJ6 369 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 NDUFAF4Q9P032 175 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ATP6V1HQ9UI12 483 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 ACAD8Q9UKU7 415 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 C19orf53Q9UNZ5 99 aaPredicted RBP4.22□□□□□ -1.73
CSTF1-205ENST00000490539 OSGIN2Q9Y236 505 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CLDN16Q9Y5I7 305 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CSAG2Q9Y5P2 127 aa4.22□□□□□ -1.73
CSTF1-205ENST00000490539 CGB1A6NKQ9 187 aa4.21□□□□□ -1.74
CSTF1-205ENST00000490539 CCL21O00585 134 aa4.21□□□□□ -1.74
CSTF1-205ENST00000490539 TO15178 435 aa4.21□□□□□ -1.74
CSTF1-205ENST00000490539 LRRTM2O43300 516 aa4.21□□□□□ -1.74
CSTF1-205ENST00000490539 IDH3BO43837 385 aa4.21□□□□□ -1.74
CSTF1-205ENST00000490539 PRKNO60260 465 aaPredicted RBP4.21□□□□□ -1.74
CSTF1-205ENST00000490539 KIAA0513O60268 411 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms