RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 CYSLTR2Q9NS75 346 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 PCDHGB5Q9Y5G0 923 aa11.36□□□□□ -0.59
EXOSC3-207ENST00000490516 WI2-2373I1.2A0A1W2PRP0 233 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 CDHR4A6H8M9 788 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 TMEM233B4DJY2 109 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 LYPLA1O75608 230 aaPredicted RBP11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 NCF2P19878 526 aaPredicted RBP11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 MAPK1P28482 360 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 ARRB2P32121 409 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 WNT5AP41221 380 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 NSUN5P1Q3KNT7 163 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 COX20Q5RI15 118 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 MBNL2Q5VZF2 373 aaKnown RBP11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 KANK2Q63ZY3 851 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 SLC27A4Q6P1M0 643 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF836Q6ZNA1 936 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 TIFABQ6ZNK6 161 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 LCA5Q86VQ0 697 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 VRK2Q86Y07 508 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 VPS37AQ8NEZ2 397 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 CFHR4Q92496 578 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 TRNT1Q96Q11 434 aaKnown RBP11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 TBX15Q96SF7 602 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 OCSTAMPQ9BR26 566 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 MMP28Q9H239 520 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 DPAGT1Q9H3H5 408 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 MTHFD2LQ9H903 347 aaPredicted RBP11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 PPP1R3CQ9UQK1 317 aa11.35□□□□□ -0.59
EXOSC3-207ENST00000490516 IQCMA0A1B0GVH7 501 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 ZNF726A6NNF4 738 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 C3orf84H3BNL1 204 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 TMEM178BH3BS89 294 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 SERPINI2O75830 405 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 PTHP01270 115 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 DBIP07108 87 aaKnown RBP11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 NQO1P15559 274 aaKnown RBP11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 IGLL1P15814 213 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 PRPS1L1P21108 318 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 CRHR1P34998 444 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 CFHR2P36980 270 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 LIPAP38571 399 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 CSNK1A1P48729 337 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 NAA20P61599 178 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 XKR7Q5GH72 579 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 IL23RQ5VWK5 629 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 ANKRD46Q86W74 232 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 OR4K5Q8NGD3 323 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 NEIL1Q96FI4 390 aaPredicted RBP11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 PLEKHA8Q96JA3 519 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 SAMD8Q96LT4 415 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 B9D2Q9BPU9 175 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 TRIM15Q9C019 465 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 RAB17Q9H0T7 212 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 ZDHHC18Q9NUE0 388 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 TMEM38BQ9NVV0 291 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 FBLN5Q9UBX5 448 aa11.34□□□□□ -0.59
EXOSC3-207ENST00000490516 IGHV1-69DA0A0B4J2H0 117 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 C22orf46C9J442 243 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 P2RY10O00398 339 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 NPHS1O60500 1241 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 TOX4O94842 621 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 CPSF4O95639 269 aaKnown RBP11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 CHEK2O96017 543 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 IGHV1-69P01742 117 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 TNFRSF1AP19438 455 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 GABRA5P31644 462 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 APLNRP35414 380 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 PITPNBP48739 271 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 PLP2Q04941 152 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 CDK5R2Q13319 367 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 LRRC74BQ6ZQY2 392 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 SERPINA11Q86U17 422 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 CLIP4Q8N3C7 705 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 RBM15BQ8NDT2 890 aaKnown RBP11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 SPATA4Q8NEY3 305 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 OR2Z1Q8NG97 314 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 OR4S1Q8NGB4 309 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 TWIST2Q8WVJ9 160 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 ITLN1Q8WWA0 313 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 LRTOMTQ8WZ04 291 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 PPP3R2Q96LZ3 170 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 TMEM246Q9BRR3 403 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 SLC19A3Q9BZV2 496 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 KIF17Q9P2E2 1029 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 MARCOQ9UEW3 520 aaPredicted RBP11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 MIOXQ9UGB7 285 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 USH1CQ9Y6N9 552 aa11.33□□□□□ -0.6
EXOSC3-207ENST00000490516 A0A087WUJ7 227 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 RNASET2O00584 256 aaKnown RBP11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 OR2T1O43869 369 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 FARS2O95363 451 aaKnown RBP11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 MMP9P14780 707 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 GCAP28676 217 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 CHI3L1P36222 383 aaPredicted RBP11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 TGFBR2P37173 567 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 DNAJB13P59910 316 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 HOXC5Q00444 222 aa11.32□□□□□ -0.6
EXOSC3-207ENST00000490516 UGT3A2Q3SY77 523 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms