RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 RUNX1T1Q06455 604 aa15.08■□□□□ 0
SEC13-218ENST00000490283 LOXL1Q08397 574 aaPredicted RBP15.08■□□□□ 0
SEC13-218ENST00000490283 ARMC4Q5T2S8 1044 aa15.08■□□□□ 0
SEC13-218ENST00000490283 GLYATQ6IB77 296 aa15.08■□□□□ 0
SEC13-218ENST00000490283 ANKS4BQ8N8V4 417 aa15.08■□□□□ 0
SEC13-218ENST00000490283 OR1J2Q8NGS2 313 aa15.08■□□□□ 0
SEC13-218ENST00000490283 NEU4Q8WWR8 484 aaPredicted RBP15.08■□□□□ 0
SEC13-218ENST00000490283 RBP7Q96R05 134 aa15.08■□□□□ 0
SEC13-218ENST00000490283 TNFRSF13CQ96RJ3 184 aa15.08■□□□□ 0
SEC13-218ENST00000490283 SEPHS2Q99611 448 aa15.08■□□□□ 0
SEC13-218ENST00000490283 CDH20Q9HBT6 801 aa15.08■□□□□ 0
SEC13-218ENST00000490283 CCNB1IP1Q9NPC3 277 aa15.08■□□□□ 0
SEC13-218ENST00000490283 KRCC1Q9NPI7 259 aaPredicted RBP15.08■□□□□ 0
SEC13-218ENST00000490283 EGFL7Q9UHF1 273 aa15.08■□□□□ 0
SEC13-218ENST00000490283 TMEM5Q9Y2B1 443 aa15.08■□□□□ 0
SEC13-218ENST00000490283 ENPP4Q9Y6X5 453 aa15.08■□□□□ 0
SEC13-218ENST00000490283 ALPK2Q86TB3 2170 aa15.07■□□□□ 0
SEC13-218ENST00000490283 SH3PXD2BA1X283 911 aa15.07■□□□□ 0
SEC13-218ENST00000490283 A6NIZ1 184 aa15.07■□□□□ 0
SEC13-218ENST00000490283 ZNF35P13682 527 aa15.07■□□□□ 0
SEC13-218ENST00000490283 MAKP20794 623 aa15.07■□□□□ 0
SEC13-218ENST00000490283 USF1P22415 310 aaPredicted RBP15.07■□□□□ 0
SEC13-218ENST00000490283 GLRXP35754 106 aa15.07■□□□□ 0
SEC13-218ENST00000490283 EVX1P49640 407 aa15.07■□□□□ 0
SEC13-218ENST00000490283 RAP1BP61224 184 aa15.07■□□□□ 0
SEC13-218ENST00000490283 RPL27P61353 136 aaKnown RBP15.07■□□□□ 0
SEC13-218ENST00000490283 RAP1AP62834 184 aa15.07■□□□□ 0
SEC13-218ENST00000490283 HSF2Q03933 536 aa15.07■□□□□ 0
SEC13-218ENST00000490283 KRT72Q14CN4 511 aa15.07■□□□□ 0
SEC13-218ENST00000490283 TBC1D28Q2M2D7 210 aa15.07■□□□□ 0
SEC13-218ENST00000490283 C10orf128Q5T292 105 aa15.07■□□□□ 0
SEC13-218ENST00000490283 MBOAT2Q6ZWT7 520 aa15.07■□□□□ 0
SEC13-218ENST00000490283 ZNF540Q8NDQ6 660 aa15.07■□□□□ 0
SEC13-218ENST00000490283 RBM15BQ8NDT2 890 aaKnown RBP15.07■□□□□ 0
SEC13-218ENST00000490283 SLC30A7Q8NEW0 376 aa15.07■□□□□ 0
SEC13-218ENST00000490283 OR51A7Q8NH64 312 aa15.07■□□□□ 0
SEC13-218ENST00000490283 MRPL24Q96A35 216 aaKnown RBP15.07■□□□□ 0
SEC13-218ENST00000490283 ZNF75AQ96N20 296 aa15.07■□□□□ 0
SEC13-218ENST00000490283 LRRC37BQ96QE4 947 aa15.07■□□□□ 0
SEC13-218ENST00000490283 ALG12Q9BV10 488 aa15.07■□□□□ 0
SEC13-218ENST00000490283 YAE1D1Q9NRH1 226 aa15.07■□□□□ 0
SEC13-218ENST00000490283 MAN2C1Q9NTJ4 1040 aa15.07■□□□□ 0
SEC13-218ENST00000490283 ARL2BPQ9Y2Y0 163 aa15.07■□□□□ 0
SEC13-218ENST00000490283 NAV3Q8IVL0 2385 aa15.07■□□□□ 0
SEC13-218ENST00000490283 NSD1Q96L73 2696 aaPredicted RBP15.07■□□□□ 0
SEC13-218ENST00000490283 NIPBLQ6KC79 2804 aaeCLIP15.07■□□□□ 0
SEC13-218ENST00000490283 TRAV27A0A087WT01 109 aa15.06■□□□□ 0
SEC13-218ENST00000490283 A0A087WUU8 490 aa15.06■□□□□ 0
SEC13-218ENST00000490283 LOC390937A0A1W2PQ73 354 aa15.06■□□□□ 0
SEC13-218ENST00000490283 FFAR1O14842 300 aa15.06■□□□□ 0
SEC13-218ENST00000490283 DCTN3O75935 186 aa15.06■□□□□ 0
SEC13-218ENST00000490283 SLC2A10O95528 541 aa15.06■□□□□ 0
SEC13-218ENST00000490283 IGHMP01871 453 aa15.06■□□□□ 0
SEC13-218ENST00000490283 H1F0P07305 194 aaKnown RBP15.06■□□□□ 0
SEC13-218ENST00000490283 RPL4P36578 427 aaKnown RBP15.06■□□□□ 0
SEC13-218ENST00000490283 ZNF133P52736 654 aaPredicted RBP15.06■□□□□ 0
SEC13-218ENST00000490283 SELENOVP59797 346 aa15.06■□□□□ 0
SEC13-218ENST00000490283 MRPS34P82930 218 aaKnown RBP15.06■□□□□ 0
SEC13-218ENST00000490283 KRTAP1-1Q07627 177 aa15.06■□□□□ 0
SEC13-218ENST00000490283 TMEM249Q2WGJ8 235 aa15.06■□□□□ 0
SEC13-218ENST00000490283 FGD3Q5JSP0 725 aa15.06■□□□□ 0
SEC13-218ENST00000490283 THEM4Q5T1C6 240 aa15.06■□□□□ 0
SEC13-218ENST00000490283 LRRC18Q8N456 261 aa15.06■□□□□ 0
SEC13-218ENST00000490283 NSMAFQ92636 917 aa15.06■□□□□ 0
SEC13-218ENST00000490283 HDAC2Q92769 488 aaKnown RBP15.06■□□□□ 0
SEC13-218ENST00000490283 DOK1Q99704 481 aa15.06■□□□□ 0
SEC13-218ENST00000490283 NMNAT1Q9HAN9 279 aaPredicted RBP15.06■□□□□ 0
SEC13-218ENST00000490283 SIAEQ9HAT2 523 aa15.06■□□□□ 0
SEC13-218ENST00000490283 NDE1Q9NXR1 346 aa15.06■□□□□ 0
SEC13-218ENST00000490283 MAGEL2Q9UJ55 1249 aa15.06■□□□□ 0
SEC13-218ENST00000490283 TLN2Q9Y4G6 2542 aa15.06■□□□□ 0
SEC13-218ENST00000490283 M0R233 179 aa15.05■□□□□ -0
SEC13-218ENST00000490283 SYNGR3O43761 229 aa15.05■□□□□ -0
SEC13-218ENST00000490283 GPRIN2O60269 458 aa15.05■□□□□ -0
SEC13-218ENST00000490283 ADRA2AP08913 450 aa15.05■□□□□ -0
SEC13-218ENST00000490283 ITGA2P17301 1181 aa15.05■□□□□ -0
SEC13-218ENST00000490283 RHCEP18577 417 aa15.05■□□□□ -0
SEC13-218ENST00000490283 APLNRP35414 380 aa15.05■□□□□ -0
SEC13-218ENST00000490283 GPR4P46093 362 aa15.05■□□□□ -0
SEC13-218ENST00000490283 LSM11P83369 360 aaKnown RBP eCLIP15.05■□□□□ -0
SEC13-218ENST00000490283 MXRA7P84157 204 aa15.05■□□□□ -0
SEC13-218ENST00000490283 GGTLC2Q14390 218 aa15.05■□□□□ -0
SEC13-218ENST00000490283 SGCAQ16586 387 aa15.05■□□□□ -0
SEC13-218ENST00000490283 IGFN1Q86VF2 1251 aa15.05■□□□□ -0
SEC13-218ENST00000490283 RNF148Q8N7C7 305 aa15.05■□□□□ -0
SEC13-218ENST00000490283 OR13C2Q8NGS9 318 aa15.05■□□□□ -0
SEC13-218ENST00000490283 FGFBP3Q8TAT2 258 aa15.05■□□□□ -0
SEC13-218ENST00000490283 KCNK17Q96T54 332 aa15.05■□□□□ -0
SEC13-218ENST00000490283 MRPL37Q9BZE1 423 aaKnown RBP15.05■□□□□ -0
SEC13-218ENST00000490283 MS4A5Q9H3V2 200 aa15.05■□□□□ -0
SEC13-218ENST00000490283 DCAF13Q9NV06 445 aaKnown RBP15.05■□□□□ -0
SEC13-218ENST00000490283 GRHPRQ9UBQ7 328 aa15.05■□□□□ -0
SEC13-218ENST00000490283 TAGLN3Q9UI15 199 aa15.05■□□□□ -0
SEC13-218ENST00000490283 ZNF346Q9UL40 294 aaKnown RBP15.05■□□□□ -0
SEC13-218ENST00000490283 FN1P02751 2386 aaKnown RBP15.05■□□□□ -0
SEC13-218ENST00000490283 A0A1W2PPW3 197 aa15.04■□□□□ -0
SEC13-218ENST00000490283 A0A1W2PRQ8 180 aa15.04■□□□□ -0
SEC13-218ENST00000490283 A8MV72 311 aaPredicted RBP15.04■□□□□ -0
SEC13-218ENST00000490283 XKRYO14609 159 aa15.04■□□□□ -0
SEC13-218ENST00000490283 PRSS23O95084 383 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms