RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 RPL27P61353 136 aaKnown RBP17.06■□□□□ 0.32
SMC4-222ENST00000490207 ANKDD1AQ495B1 522 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 SLC36A2Q495M3 483 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 SLC16A14Q7RTX9 510 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 DPPA2Q7Z7J5 298 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 OAFQ86UD1 273 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 IGFN1Q86VF2 1251 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 ZNF584Q8IVC4 421 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 CDK20Q8IZL9 346 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 OR13C2Q8NGS9 318 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 OR51A7Q8NH64 312 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 C10orf105Q8TEF2 133 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 ALG12Q9BV10 488 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 RNF121Q9H920 327 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 TAGLN3Q9UI15 199 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 CMAHPQ9Y471 501 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 ANK3Q12955 4377 aaKnown RBP17.06■□□□□ 0.32
SMC4-222ENST00000490207 NAV3Q8IVL0 2385 aa17.06■□□□□ 0.32
SMC4-222ENST00000490207 CSPG4Q6UVK1 2322 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 HIVEP2P31629 2446 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 CHD3Q12873 2000 aaKnown RBP17.05■□□□□ 0.32
SMC4-222ENST00000490207 GPRIN2O60269 458 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 DCTN3O75935 186 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 SERPINA5P05154 406 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 PDLIM4P50479 330 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 RPS23P62266 143 aaKnown RBP17.05■□□□□ 0.32
SMC4-222ENST00000490207 FMODQ06828 376 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 GKAP1Q5VSY0 366 aaPredicted RBP17.05■□□□□ 0.32
SMC4-222ENST00000490207 FAM205BPQ63HN1 556 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 TBPL2Q6SJ96 375 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 TSEN54Q7Z6J9 526 aaKnown RBP17.05■□□□□ 0.32
SMC4-222ENST00000490207 PIGWQ7Z7B1 504 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 PGAM4Q8N0Y7 254 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 LRRC75AQ8NAA5 344 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 FAM156AQ8NDB6 213 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 LRRC37BQ96QE4 947 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 TSPAN32Q96QS1 320 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 KCNK17Q96T54 332 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 RAB1BQ9H0U4 201 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 NMNAT1Q9HAN9 279 aaPredicted RBP17.05■□□□□ 0.32
SMC4-222ENST00000490207 SMURF2Q9HAU4 748 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 DYNLRB1Q9NP97 96 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 DCAF13Q9NV06 445 aaKnown RBP17.05■□□□□ 0.32
SMC4-222ENST00000490207 SLC7A8Q9UHI5 535 aa17.05■□□□□ 0.32
SMC4-222ENST00000490207 ZNF346Q9UL40 294 aaKnown RBP17.05■□□□□ 0.32
SMC4-222ENST00000490207 IGKV1D-43A0A0B4J1Z2 117 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 H1F0P07305 194 aaKnown RBP17.04■□□□□ 0.32
SMC4-222ENST00000490207 TCN1P20061 433 aaPredicted RBP17.04■□□□□ 0.32
SMC4-222ENST00000490207 GLRXP35754 106 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 FHL1Q13642 323 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 FGD3Q5JSP0 725 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 RRM2BQ7LG56 351 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 LRRC18Q8N456 261 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 FAM86B1Q8N7N1 296 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 SLC30A7Q8NEW0 376 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 NSMAFQ92636 917 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 MRPL24Q96A35 216 aaKnown RBP17.04■□□□□ 0.32
SMC4-222ENST00000490207 NMD3Q96D46 503 aaKnown RBP17.04■□□□□ 0.32
SMC4-222ENST00000490207 TNFRSF13CQ96RJ3 184 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 DOK1Q99704 481 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 C1orf198Q9H425 327 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 MYOZ1Q9NP98 299 aaPredicted RBP17.04■□□□□ 0.32
SMC4-222ENST00000490207 ARL8BQ9NVJ2 186 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 MAGEL2Q9UJ55 1249 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 TMEM5Q9Y2B1 443 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 FAM32AQ9Y421 112 aaKnown RBP17.04■□□□□ 0.32
SMC4-222ENST00000490207 V9GYQ6 96 aa17.04■□□□□ 0.32
SMC4-222ENST00000490207 TMEM129A0AVI4 362 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 CD5LO43866 347 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 ERCC1P07992 297 aaPredicted RBP17.03■□□□□ 0.32
SMC4-222ENST00000490207 HSD17B1P14061 328 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 RHCEP18577 417 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 MRPS34P82930 218 aaKnown RBP17.03■□□□□ 0.32
SMC4-222ENST00000490207 LOXL1Q08397 574 aaPredicted RBP17.03■□□□□ 0.32
SMC4-222ENST00000490207 CARTPTQ16568 116 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 FXNQ16595 210 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 MSMPQ1L6U9 139 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 SAMD4BQ5PRF9 694 aaKnown RBP17.03■□□□□ 0.32
SMC4-222ENST00000490207 SLC25A47Q6Q0C1 308 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 ZNF519Q8TB69 540 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 FNDC8Q8TC99 324 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 SLC7A13Q8TCU3 470 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 FAM46AQ96IP4 442 aaKnown RBP17.03■□□□□ 0.32
SMC4-222ENST00000490207 PIMREGQ9BSJ6 248 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 MRPL37Q9BZE1 423 aaKnown RBP17.03■□□□□ 0.32
SMC4-222ENST00000490207 GORASP2Q9H8Y8 452 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 NDUFAF4Q9P032 175 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 UGT2A1Q9Y4X1 527 aa17.03■□□□□ 0.32
SMC4-222ENST00000490207 SH3PXD2BA1X283 911 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 A6NIZ1 184 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 NDUFS8O00217 210 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 CDC42EP2O14613 210 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 MGRN1O60291 552 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 CDAP32320 146 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 RPL4P36578 427 aaKnown RBP17.02■□□□□ 0.32
SMC4-222ENST00000490207 RAP1BP61224 184 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 RAP1AP62834 184 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 MXRA7P84157 204 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 VLDLRP98155 873 aa17.02■□□□□ 0.32
SMC4-222ENST00000490207 TBC1D28Q2M2D7 210 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 151.4 ms